myRT

myRT report for GCA_000381625.1_ASM38162v1

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Seq: KB906767.1 Acidobacteriaceae bacterium KBS 96 genomic scaffold G004DRAFT_scaffold00001.1, whole genome shotgun sequence (6690628 bp)
Overview 1 RT 1: 2425236-2430213 bp 2 RT 2: 6477081-6480912 bp Neighborhood of RT #1 [2425236, 2430425] DDE_3 RVT-GII GIIM HTH_32 rve_3 Methyltransf_25 Neighborhood of RT #2 [6477081, 6480912] RVT-GII IS285 Feature: gene Location: 2425236-2425670 bp Feature: gene Location: 2426003-2426563 bp Feature: domain Description: DDE_3 Location: 2426021-2426369 bp Feature: domain Description: DDE_3 Location: 2426021 -2426369 bp Feature: gene Location: 2426755-2428062 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2427037-2427679 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2427037-2427679 bp Feature: domain Description: GIIM Note: maturase Location: 2427757-2427970 bp Feature: domain Description: GIIM Note: maturase Location: 2427757-2427970 bp Feature: gene Location: 2428031-2429152 bp Feature: domain Description: HTH_32 Location: 2428313-2428508 bp Feature: domain Description: HTH_32 Location: 242831 3-2428508 bp Feature: domain Description: rve_3 Location: 2428829-2429012 bp Feature: domain Description: rve_3 Location: 2428829-242901 2 bp Feature: gene Location: 2429523-2430425 bp Feature: domain Description: Methyltransf_25 Location: 2429931-2430213 bp Feature: domain Description: Methyltransf_25 Location: 2429931 -243021 3 bp Feature: gene Location: 6477081-6477533 bp Feature: gene Location: 6477537-6477917 bp Feature: gene Location: 6477829-6479082 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6478324-6478936 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6478324-6478936 bp Feature: gene Location: 6479321-6480619 bp Feature: domain Description: IS285 Location: 6479453-6480593 bp Feature: domain Description: IS285 Location: 6479453-6480593 bp Feature: gene Location: 6480760-6480912 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DDE_3 (pfam13358), RVT-GII, GIIM (pfam08388), HTH_32 (pfam13565), rve_3 (pfam13683), Methyltransf_25 (pfam13649), IS285 (COG3328)