myRT

myRT report for GCA_000381665.1_ASM38166v1

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Seq: KB906810.1 Teredinibacter turnerae T8412 genomic scaffold G009DRAFT_scaffold00015.15, whole genome shotgun sequence (157596 bp)
Overview 1 RT 1: 155628-157493 bp Neighborhood of RT #1 [155628, 157594] AzoR RVT-GII GIIM Feature: gene Location: 155628-156332 bp Feature: domain Description: AzoR Location: 155631-156273 bp Feature: domain Description: AzoR Location: 1 55631 -1 56273 bp Feature: gene Location: 156361-156672 bp Feature: gene Location: 156869-157594 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 156884-157196 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 56884-1 571 96 bp Feature: domain Description: GIIM Note: maturase Location: 157295-157493 bp Feature: domain Description: GIIM Note: maturase Location: 1 57295-1 57493 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT AzoR (COG1182), RVT-GII, GIIM (pfam08388)

Seq: KB906812.1 Teredinibacter turnerae T8412 genomic scaffold G009DRAFT_scaffold00017.17, whole genome shotgun sequence (109769 bp)
Overview 1 RT 1: 53677-59669 bp Neighborhood of RT #1 [53677, 59669] TIGR03986 TIGR03986 DUF5051 CRISPR_Cas6 RVT-CRISPR Cas1_I-II-III Cas2_I_II_III Feature: gene Location: 53677-55314 bp Feature: domain Description: TIGR03986 Location: 53698-54205 bp Feature: domain Description: TIGR03986 Location: 53698-542 05 bp Feature: domain Description: TIGR03986 Location: 54271-54919 bp Feature: domain Description: TIGR03986 Location: 542 71-54919 bp Feature: gene Location: 55331-55891 bp Feature: domain Description: DUF5051 Location: 55340-55865 bp Feature: domain Description: DUF5051 Location: 55340-55865 bp Feature: gene Location: 55932-58976 bp Feature: domain Description: CRISPR_Cas6 Location: 56457-56841 bp Feature: domain Description: CRISPR_Cas6 Location: 56457-56841 bp Feature: RT Description: RVT-CRISPR Note: CRISPR RT Location: 57147-57747 bp Feature: RT Description: RVT-CRISPR Note: CRISPR RT Location: 57147-57747 bp Feature: domain Description: Cas1_I-II-III Location: 58038-58941 bp Feature: domain Description: Cas1_I-II-III Location: 58038-58941 bp Feature: gene Location: 58991-59269 bp Feature: domain Description: Cas2_I_II_III Location: 59003-59231 bp Feature: domain Description: Cas2 _I_II_III Location: 59003-592 31 bp Feature: gene Location: 59352-59669 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT TIGR03986 (CRISPR-associated protein), DUF5051 (pfam16473), CRISPR_Cas6 (pfam10040), RVT-CRISPR, Cas1_I-II-III (cl00656), Cas2_I_II_III (cl11442)

Seq: KB906814.1 Teredinibacter turnerae T8412 genomic scaffold G009DRAFT_scaffold00019.19, whole genome shotgun sequence (102405 bp)
Overview 1 RT 1: 99837-102302 bp Neighborhood of RT #1 [99837, 102403] RVT-GII GIIM Feature: gene Location: 99837-100178 bp Feature: gene Location: 100347-101558 bp Feature: gene Location: 101678-102403 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 101693-102005 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 101693 -102005 bp Feature: domain Description: GIIM Note: maturase Location: 102104-102302 bp Feature: domain Description: GIIM Note: maturase Location: 102104-1023 02 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: KB906835.1 Teredinibacter turnerae T8412 genomic scaffold G009DRAFT_scaffold00040.40, whole genome shotgun sequence (6072 bp)
Overview 1 RT 1: 2466-5245 bp Neighborhood of RT #1 [2466, 5245] HEPN RVT-GII GIIM Feature: gene Location: 2466-2762 bp Feature: gene Location: 2885-3358 bp Feature: domain Description: HEPN Location: 2975-3224 bp Feature: domain Description: HEPN Location: 2975-3224 bp Feature: gene Location: 3473-4777 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3743-4361 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 374 3-4 361 bp Feature: domain Description: GIIM Note: maturase Location: 4415-4640 bp Feature: domain Description: GIIM Note: maturase Location: 4 4 15-4 64 0 bp Feature: gene Location: 4820-5005 bp Feature: gene Location: 5057-5245 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HEPN (smart00748), RVT-GII, GIIM (pfam08388)