myRT

myRT report for GCA_000381745.1_ASM38174v1

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Seq: KB907054.1 Psychromonas ossibalaenae ATCC BAA-1528 strain JAMM 0738 genomic scaffold G327DRAFT_scaffold00088.88, whole genome shotgun sequence (8238 bp)
Overview 1 RT 1: 597-7642 bp Neighborhood of RT #1 [597, 7642] CspC RVT-Retrons SLATT_5 RVT-UG17 Feature: gene Location: 597-815 bp Feature: gene Location: 837-1061 bp Feature: domain Description: CspC Location: 852-1038 bp Feature: domain Description: CspC Location: 852-1 038 bp Feature: gene Location: 1048-2235 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1195-1759 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1 1 95-1 759 bp Feature: gene Location: 2266-2607 bp Feature: gene Location: 2865-3053 bp Feature: gene Location: 4829-5185 bp Feature: gene Location: 5722-6096 bp Feature: domain Description: SLATT_5 Location: 5731-6079 bp Feature: domain Description: SLATT_5 Location: 5731 -6079 bp Feature: gene Location: 6083-7402 bp Feature: RT Description: RVT-UG17 Note: UG17 RT Location: 6308-6890 bp Feature: RT Description: RVT-UG1 7 Note: UG1 7 RT Location: 6308-6890 bp Feature: gene Location: 7424-7642 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT CspC (COG1278), RVT-Retrons, SLATT_5 (pfam18160), RVT-UG17

Seq: KB907065.1 Psychromonas ossibalaenae ATCC BAA-1528 strain JAMM 0738 genomic scaffold G327DRAFT_scaffold00099.99, whole genome shotgun sequence (1937 bp)
Overview 1 RT 1: 88-1750 bp Neighborhood of RT #1 [88, 1830] RVT-GII GIIM Feature: gene Location: 88-219 bp Feature: gene Location: 541-1830 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 796-1465 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 796-1465 bp Feature: domain Description: GIIM Note: maturase Location: 1558-1750 bp Feature: domain Description: GIIM Note: maturase Location: 1558-1750 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)