myRT

myRT report for GCA_000382245.1_ASM38224v1

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Seq: KB907863.1 Kushneria aurantia DSM 21353 genomic scaffold H146DRAFT_scaffold00002.2, whole genome shotgun sequence (261441 bp)
Overview 1 RT 1: 99414-100974 bp Neighborhood of RT #1 [99414, 101009] RVT-GII GIIM RHH_6 PIN_VapC-like Feature: gene Location: 99414-100184 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 99420-99735 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 99420-99735 bp Feature: domain Description: GIIM Note: maturase Location: 99786-100011 bp Feature: domain Description: GIIM Note: maturase Location: 99786-1 0001 1 bp Feature: gene Location: 100360-100599 bp Feature: domain Description: RHH_6 Location: 100366-100594 bp Feature: domain Description: RHH_6 Location: 1 00366-1 00594 bp Feature: gene Location: 100701-101009 bp Feature: domain Description: PIN_VapC-like Location: 100704-100974 bp Feature: domain Description: PIN_VapC-like Location: 1 00704-1 00974 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), RHH_6 (pfam16762), PIN_VapC-like (cd18715)

Seq: KB907886.1 Kushneria aurantia DSM 21353 genomic scaffold H146DRAFT_scaffold00025.25, whole genome shotgun sequence (53721 bp)
Overview 1 RT 1: 51530-53546 bp Neighborhood of RT #1 [51530, 53719] NfsB_like_nitroreductase RVT-GII GIIM Feature: gene Location: 51530-51808 bp Feature: gene Location: 52000-52635 bp Feature: domain Description: NfsB_like_nitroreductase Location: 52009-52615 bp Feature: domain Description: NfsB_like_nitroreductase Location: 52 009-52 615 bp Feature: gene Location: 52727-53719 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 52733-53276 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 52 733-532 76 bp Feature: domain Description: GIIM Note: maturase Location: 53321-53546 bp Feature: domain Description: GIIM Note: maturase Location: 5332 1-53546 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT NfsB_like_nitroreductase, RVT-GII, GIIM (pfam08388)

Seq: KB907907.1 Kushneria aurantia DSM 21353 genomic scaffold H146DRAFT_scaffold00046.46, whole genome shotgun sequence (8251 bp)
Overview 1 RT 1: 4123-7974 bp Neighborhood of RT #1 [4123, 7976] HTH_Tnp_1 HTH_Tnp_1 RVT-GII GIIM Tra5 CHASE4 Feature: gene Location: 4123-4527 bp Feature: domain Description: HTH_Tnp_1 Location: 4189-4444 bp Feature: domain Description: HTH_Tnp_1 Location: 4189-4444 bp Feature: gene Location: 4524-4982 bp Feature: domain Description: HTH_Tnp_1 Location: 4563-4698 bp Feature: domain Description: HTH_Tnp_1 Location: 4563 -4698 bp Feature: gene Location: 5325-6746 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5703-6360 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5703 -63 60 bp Feature: domain Description: GIIM Note: maturase Location: 6447-6660 bp Feature: domain Description: GIIM Note: maturase Location: 6447-6660 bp Feature: gene Location: 6799-7527 bp Feature: domain Description: Tra5 Location: 6859-7285 bp Feature: domain Description: Tra5 Location: 6859-7285 bp Feature: gene Location: 7734-7976 bp Feature: domain Description: CHASE4 Location: 7764-7974 bp Feature: domain Description: CHASE4 Location: 7764-7974 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HTH_Tnp_1 (pfam01527), RVT-GII, GIIM (pfam08388), Tra5 (COG2801), CHASE4 (pfam05228)

Seq: KB907919.1 Kushneria aurantia DSM 21353 genomic scaffold H146DRAFT_scaffold00058.58, whole genome shotgun sequence (2241 bp)
Overview 1 RT 1: 114-1925 bp Neighborhood of RT #1 [114, 2014] RVT-Retrons PhdYeFM_antitox Feature: gene Location: 114-434 bp Feature: gene Location: 629-1786 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 884-1514 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 884 -1514 bp Feature: gene Location: 1793-2014 bp Feature: domain Description: PhdYeFM_antitox Location: 1811-1925 bp Feature: domain Description: PhdYeFM_antitox Location: 1811-1925 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-Retrons, PhdYeFM_antitox (pfam02604)