myRT

myRT report for GCA_000382425.1_ASM38242v1

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Seq: KB908302.1 Empedobacter brevis NBRC 14943 = ATCC 43319 genomic scaffold H277DRAFT_scaffold00012.12, whole genome shotgun sequence (112723 bp)
Overview 1 RT 1: 88150-93910 bp Neighborhood of RT #1 [88150, 93910] INTN1_C_like WYL RVT-Retrons Feature: gene Location: 88150-88605 bp Feature: domain Description: INTN1_C_like Location: 88153-88558 bp Feature: domain Description: INTN1 _C_like Location: 881 53-88558 bp Feature: gene Location: 88863-89852 bp Feature: domain Description: WYL Location: 89328-89838 bp Feature: domain Description: WYL Location: 89328-89838 bp Feature: gene Location: 90202-91482 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 90400-90997 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 90400-90997 bp Feature: gene Location: 91484-92710 bp Feature: gene Location: 92714-93910 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT INTN1_C_like (cd01185), WYL (pfam13280), RVT-Retrons

Seq: KB908309.1 Empedobacter brevis NBRC 14943 = ATCC 43319 genomic scaffold H277DRAFT_scaffold00019.19, whole genome shotgun sequence (28689 bp)
Overview 1 RT 1: 5480-13434 bp Neighborhood of RT #1 [5480, 17393] RteC RVT-UG8 RVT-UG3 ComEC ComEC NACHT Feature: gene Location: 5480-6325 bp Feature: domain Description: RteC Location: 5663-6317 bp Feature: domain Description: RteC Location: 5663-6317 bp Feature: gene Location: 6273-6419 bp Feature: gene Location: 6654-8441 bp Feature: RT Description: RVT-UG8 Note: UG8 RT Location: 7218-7683 bp Feature: RT Description: RVT-UG8 Note: UG8 RT Location: 72 18-7683 bp Feature: gene Location: 8445-9953 bp Feature: RT Description: RVT-UG3 Note: UG3 RT Location: 8916-9456 bp Feature: RT Description: RVT-UG3 Note: UG3 RT Location: 8916-9456 bp Feature: gene Location: 11045-12232 bp Feature: domain Description: ComEC Location: 11078-11267 bp Feature: domain Description: ComEC Location: 11078-112 67 bp Feature: domain Description: ComEC Location: 11786-12095 bp Feature: domain Description: ComEC Location: 11786-12 095 bp Feature: gene Location: 12423-17393 bp Feature: domain Description: NACHT Location: 13185-13434 bp Feature: domain Description: NACHT Location: 13185-13434 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RteC (pfam09357), RVT-UG8, RVT-UG3, ComEC (COG2333), NACHT (pfam05729)