myRT

myRT report for GCA_000383235.1_ASM38323v1

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Seq: KB910928.1 Bacillus sp. 123MFChir2 genomic scaffold H280DRAFT_scaffold00005.5, whole genome shotgun sequence (142197 bp)
Overview 1 RT 1: 23885-32472 bp Neighborhood of RT #1 [23885, 32474] PRK13922 PRK13927 RVT-GII HNHc RVT-GII Intron_maturas2 HNHc PRK00024 PRK00148 Feature: gene Location: 23885-24739 bp Feature: domain Description: PRK13922 Location: 23888-24713 bp Feature: domain Description: PRK1 3922 Location: 23888-2471 3 bp Feature: gene Location: 24789-25805 bp Feature: domain Description: PRK13927 Location: 24807-25797 bp Feature: domain Description: PRK1 3927 Location: 24807-25797 bp Feature: gene Location: 26138-28009 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 26459-27167 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 26459-271 67 bp Feature: domain Description: HNHc Note: nucleases Location: 27761-27929 bp Feature: domain Description: HNHc Note: nucleases Location: 27761 -27929 bp Feature: gene Location: 28894-30783 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 29164-30004 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 291 64-30004 bp Feature: domain Description: Intron_maturas2 Location: 30103-30367 bp Feature: domain Description: Intron_maturas2 Location: 301 03-30367 bp Feature: domain Description: HNHc Note: nucleases Location: 30574-30727 bp Feature: domain Description: HNHc Note: nucleases Location: 30574-30727 bp Feature: gene Location: 31328-31885 bp Feature: domain Description: PRK00024 Location: 31340-31868 bp Feature: domain Description: PRK00024 Location: 31 340-31 868 bp Feature: gene Location: 31899-32474 bp Feature: domain Description: PRK00148 Location: 31923-32472 bp Feature: domain Description: PRK001 48 Location: 31 923-32472 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK13922 (rod shape-determining protein MreC; Provisional), PRK13927 (rod shape-determining protein MreB; Provisional), RVT-GII, HNHc (smart00507), Intron_maturas2 (pfam01348), PRK00024 (DNA repair protein RadC), PRK00148 (Maf-like protein; Reviewed)

Seq: KB910932.1 Bacillus sp. 123MFChir2 genomic scaffold H280DRAFT_scaffold00009.9, whole genome shotgun sequence (104250 bp)
Overview 1 RT 1: 40404-46687 bp Neighborhood of RT #1 [40404, 46731] SplA PRK07726 Toprim_Crpt RVT-GII HNHc RVT_N RVT-GII PRK07726 KOG2414 Feature: gene Location: 40404-40667 bp Feature: domain Description: SplA Location: 40425-40638 bp Feature: domain Description: SplA Location: 4042 5-40638 bp Feature: gene Location: 41487-42434 bp Feature: domain Description: PRK07726 Location: 41490-42228 bp Feature: domain Description: PRK0772 6 Location: 41490-42 2 2 8 bp Feature: domain Description: Toprim_Crpt Location: 42258-42429 bp Feature: domain Description: Toprim_Crpt Location: 42 2 58-42 42 9 bp Feature: gene Location: 42601-43968 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 42628-43132 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 42 62 8-43132 bp Feature: domain Description: HNHc Note: nucleases Location: 43711-43846 bp Feature: domain Description: HNHc Note: nucleases Location: 43711-43846 bp Feature: gene Location: 44036-44392 bp Feature: domain Description: RVT_N Location: 44069-44216 bp Feature: domain Description: RVT_N Location: 44069-442 16 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 44294-44384 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 442 94-44384 bp Feature: gene Location: 45118-46263 bp Feature: domain Description: PRK07726 Location: 45121-46249 bp Feature: domain Description: PRK0772 6 Location: 4512 1-462 49 bp Feature: gene Location: 46510-46731 bp Feature: domain Description: KOG2414 Location: 46552-46687 bp Feature: domain Description: KOG2 414 Location: 46552 -46687 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT SplA (pfam11132), PRK07726 (DNA topoisomerase 3), Toprim_Crpt (pfam13342), RVT-GII, HNHc (smart00507), RVT_N (pfam13655), KOG2414 (KOG2414, Putative Xaa-Pro aminopeptidase )

Seq: KB910941.1 Bacillus sp. 123MFChir2 genomic scaffold H280DRAFT_scaffold00018.18, whole genome shotgun sequence (70935 bp)
Overview 1 RT 1: 1899-5592 bp Neighborhood of RT #1 [1899, 5621] DDE_Tnp_IS66 DDE_Tnp_IS66_C PDDEXK_2 RVT_N RVT-GII GIIM HNHc PDDEXK_2 spore_yhbH Feature: gene Location: 1899-2186 bp Feature: domain Description: DDE_Tnp_IS66 Location: 1902-2013 bp Feature: domain Description: DDE_Tnp_IS66 Location: 1902-2013 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 2031-2154 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 203 1-2154 bp Feature: gene Location: 2261-2623 bp Feature: domain Description: PDDEXK_2 Location: 2381-2606 bp Feature: domain Description: PDDEXK_2 Location: 23 81-2606 bp Feature: gene Location: 2613-4409 bp Feature: domain Description: RVT_N Location: 2661-2904 bp Feature: domain Description: RVT_N Location: 2661-2904 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2961-3630 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2961-3 63 0 bp Feature: domain Description: GIIM Note: maturase Location: 3690-3924 bp Feature: domain Description: GIIM Note: maturase Location: 3 690-3 924 bp Feature: domain Description: HNHc Note: nucleases Location: 4125-4290 bp Feature: domain Description: HNHc Note: nucleases Location: 4125-4290 bp Feature: gene Location: 4984-5253 bp Feature: domain Description: PDDEXK_2 Location: 5011-5242 bp Feature: domain Description: PDDEXK_2 Location: 5011-5242 bp Feature: gene Location: 5346-5621 bp Feature: domain Description: spore_yhbH Location: 5466-5592 bp Feature: domain Description: spore_yhbH Location: 5466-5592 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DDE_Tnp_IS66 (pfam03050), DDE_Tnp_IS66_C (pfam13817), PDDEXK_2 (pfam12784), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNHc (smart00507), spore_yhbH (TIGR02877)

Seq: KB910981.1 Bacillus sp. 123MFChir2 genomic scaffold H280DRAFT_scaffold00058.58, whole genome shotgun sequence (24850 bp)
Overview 1 RT 1: 5852-10770 bp Neighborhood of RT #1 [5852, 10770] HflX YadS RVT-GII HNHc Feature: gene Location: 5852-7132 bp Feature: domain Description: HflX Location: 5864-7031 bp Feature: domain Description: HflX Location: 5864 -7031 bp Feature: gene Location: 7221-7844 bp Feature: domain Description: YadS Location: 7224-7821 bp Feature: domain Description: YadS Location: 7224 -7821 bp Feature: gene Location: 8057-9856 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8354-9047 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8354 -904 7 bp Feature: domain Description: HNHc Note: nucleases Location: 9605-9743 bp Feature: domain Description: HNHc Note: nucleases Location: 9605-974 3 bp Feature: gene Location: 10086-10235 bp Feature: gene Location: 10627-10770 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HflX (COG2262), YadS (COG2860), RVT-GII, HNHc (smart00507)