myRT

myRT report for GCA_000383855.1_ASM38385v1

Download annotations/find similar RTs

Seq: KB912877.1 Methylobacter marinus A45 genomic scaffold MetmaDRAFT_scaffold1.1, whole genome shotgun sequence (4984690 bp)
Overview 1 RT 1: 832283-837704 bp 2 RT 2: 1209567-1216637 bp 3 RT 3: 2919094-2922567 bp 4 RT 4: 3198807-3205898 bp 5 RT 5: 3279665-3283541 bp 6 RT 6: 4801470-4806401 bp Neighborhood of RT #1 [832283, 837772] PRK04350 PRK07199 RVT-GII GIIM RVT-GII VOC_like Macro_Poa1p_like Neighborhood of RT #2 [1209567, 1216915] TolQ TolQ DUF3450 TolQ RVT-GII GIIM PYR_PYL_RCAR_like AAA Neighborhood of RT #3 [2919094, 2922587] COG3795 RVT-GII GIIM MAPEG COG3865 Neighborhood of RT #4 [3198807, 3205990] QueC RVT-UG7 Peptidases_S8_Subtilisin_like_2 KOG0730 Neighborhood of RT #5 [3279665, 3283541] DDE_Tnp_IS66_C RVT-GII KOG4768 HAD_PPase Neighborhood of RT #6 [4801470, 4806401] PRK00329 PRK11112 RVT-GII GIIM RVT-GII DadA Rieske_YhfW_C Feature: gene Location: 832283-833920 bp Feature: domain Description: PRK04350 Location: 832433-833882 bp Feature: domain Description: PRK04350 Location: 832433-833882 bp Feature: gene Location: 833935-834822 bp Feature: domain Description: PRK07199 Location: 833941-834805 bp Feature: domain Description: PRK071 99 Location: 833941 -834805 bp Feature: gene Location: 834897-835556 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 834900-835131 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 834900-8351 31 bp Feature: domain Description: GIIM Note: maturase Location: 835179-835407 bp Feature: domain Description: GIIM Note: maturase Location: 8351 79-835407 bp Feature: gene Location: 835579-836148 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 835789-836044 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 835789-836044 bp Feature: gene Location: 836832-837218 bp Feature: domain Description: VOC_like Location: 836859-837195 bp Feature: domain Description: VOC_like Location: 836859-8371 95 bp Feature: gene Location: 837281-837772 bp Feature: domain Description: Macro_Poa1p_like Location: 837284-837704 bp Feature: domain Description: Macro_Poa1 p_like Location: 837284-837704 bp Feature: gene Location: 1209567-1210091 bp Feature: domain Description: TolQ Location: 1209633-1209735 bp Feature: domain Description: TolQ Location: 1 209633-1 209735 bp Feature: domain Description: TolQ Location: 1209798-1210017 bp Feature: domain Description: TolQ Location: 1 209798-1 21 001 7 bp Feature: gene Location: 1210096-1212126 bp Feature: domain Description: DUF3450 Location: 1210399-1210915 bp Feature: domain Description: DUF3450 Location: 1 21 0399-1 21 091 5 bp Feature: domain Description: TolQ Location: 1211656-1212058 bp Feature: domain Description: TolQ Location: 1 21 1 656-1 21 2058 bp Feature: gene Location: 1212162-1213412 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1212372-1212987 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 21 2372-1 21 2987 bp Feature: domain Description: GIIM Note: maturase Location: 1213035-1213263 bp Feature: domain Description: GIIM Note: maturase Location: 1 21 3035-1 21 3263 bp Feature: gene Location: 1214433-1214963 bp Feature: domain Description: PYR_PYL_RCAR_like Location: 1214514-1214958 bp Feature: domain Description: PYR_PYL_RCAR_like Location: 1 21 451 4-1 21 4958 bp Feature: gene Location: 1215077-1216915 bp Feature: domain Description: AAA Location: 1216301-1216637 bp Feature: domain Description: AAA Location: 1 21 6301 -1 21 6637 bp Feature: gene Location: 2919094-2919435 bp Feature: domain Description: COG3795 Location: 2919097-2919424 bp Feature: domain Description: COG3795 Location: 291 9097-291 9424 bp Feature: gene Location: 2919716-2920069 bp Feature: gene Location: 2920202-2921515 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2920433-2921054 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2920433-2921 054 bp Feature: domain Description: GIIM Note: maturase Location: 2921099-2921318 bp Feature: domain Description: GIIM Note: maturase Location: 2921 099-2921 31 8 bp Feature: gene Location: 2921615-2922001 bp Feature: domain Description: MAPEG Location: 2921633-2921972 bp Feature: domain Description: MAPEG Location: 2921 633-2921 972 bp Feature: gene Location: 2922102-2922587 bp Feature: domain Description: COG3865 Location: 2922117-2922567 bp Feature: domain Description: COG3865 Location: 29221 1 7-2922567 bp Feature: gene Location: 3198807-3199481 bp Feature: domain Description: QueC Location: 3198813-3199476 bp Feature: domain Description: QueC Location: 31 9881 3-31 99476 bp Feature: gene Location: 3199969-3200700 bp Feature: gene Location: 3200780-3202318 bp Feature: RT Description: RVT-UG7 Note: UG7 RT Location: 3201152-3201572 bp Feature: RT Description: RVT-UG7 Note: UG7 RT Location: 3201 1 52-3201 572 bp Feature: gene Location: 3202465-3204954 bp Feature: domain Description: Peptidases_S8_Subtilisin_like_2 Location: 3203314-3204229 bp Feature: domain Description: Peptidases_S8_Subtilisin_like_2 Location: 320331 4-3204229 bp Feature: gene Location: 3204983-3205990 bp Feature: domain Description: KOG0730 Location: 3205313-3205898 bp Feature: domain Description: KOG0730 Location: 320531 3-3205898 bp Feature: gene Location: 3279665-3279895 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 3279737-3279851 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 3279737-3279851 bp Feature: gene Location: 3279948-3280262 bp Feature: gene Location: 3280302-3281777 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3280692-3281385 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3280692-3281 385 bp Feature: domain Description: KOG4768 Location: 3281517-3281598 bp Feature: domain Description: KOG4768 Location: 3281 51 7-3281 598 bp Feature: gene Location: 3282039-3282818 bp Feature: domain Description: HAD_PPase Location: 3282063-3282792 bp Feature: domain Description: HAD_PPase Location: 3282063-3282792 bp Feature: gene Location: 3283245-3283541 bp Feature: gene Location: 4801470-4801724 bp Feature: domain Description: PRK00329 Location: 4801473-4801692 bp Feature: domain Description: PRK00329 Location: 4801 473-4801 692 bp Feature: gene Location: 4801721-4802449 bp Feature: domain Description: PRK11112 Location: 4801724-4802432 bp Feature: domain Description: PRK1 1 1 1 2 Location: 4801 724-4802432 bp Feature: gene Location: 4802595-4803347 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4802601-4802922 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4802601 -4802922 bp Feature: domain Description: GIIM Note: maturase Location: 4802970-4803198 bp Feature: domain Description: GIIM Note: maturase Location: 4802970-48031 98 bp Feature: gene Location: 4803527-4803847 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4803737-4803830 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4803737-4803830 bp Feature: gene Location: 4804537-4806051 bp Feature: domain Description: DadA Location: 4804609-4805707 bp Feature: domain Description: DadA Location: 4804609-4805707 bp Feature: domain Description: Rieske_YhfW_C Location: 4805791-4806037 bp Feature: domain Description: Rieske_YhfW_C Location: 4805791 -4806037 bp Feature: gene Location: 4806069-4806401 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK04350 (thymidine phosphorylase; Provisional), PRK07199 (ribose-phosphate diphosphokinase), RVT-GII, GIIM (pfam08388), VOC_like (cd16355), Macro_Poa1p_like, TolQ (COG0811), DUF3450 (pfam11932), PYR_PYL_RCAR_like (cd07821), AAA (TIGR00769)
COG3795 (Uncharacterized conserved protein ), MAPEG (pfam01124), COG3865 (Glyoxalase superfamily enzyme, possibly 3-demethylubiquinone-9 3-methyltransferase ), QueC (pfam06508), RVT-UG7, Peptidases_S8_Subtilisin_like_2 (cd04847), KOG0730 (KOG0730, AAA+-type ATPase ), DDE_Tnp_IS66_C (pfam13817), KOG4768 (KOG4768, Mitochondrial mRNA maturase ), HAD_PPase (cd07509)
PRK00329 (GIY-YIG nuclease superfamily protein; Validated), PRK11112 (tRNA pseudouridine synthase C; Provisional), DadA (COG0665), Rieske_YhfW_C (cd03477)