myRT

myRT report for GCA_000383875.1_ASM38387v1

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Seq: KB912881.1 Caldibacillus debilis DSM 16016 genomic scaffold A3EQDRAFT_scaffold_10.11, whole genome shotgun sequence (105737 bp)
Overview 1 RT 1: 102751-105670 bp Neighborhood of RT #1 [102751, 105670] DNA_bind_RsfA RVT-GII GIIM Feature: gene Location: 102751-102897 bp Feature: gene Location: 103113-103817 bp Feature: domain Description: DNA_bind_RsfA Location: 103119-103758 bp Feature: domain Description: DNA_bind_RsfA Location: 1 031 1 9-1 03758 bp Feature: gene Location: 103915-105177 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 104116-104734 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 041 1 6-1 04734 bp Feature: domain Description: GIIM Note: maturase Location: 104782-105001 bp Feature: domain Description: GIIM Note: maturase Location: 1 04782-1 05001 bp Feature: gene Location: 105536-105670 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DNA_bind_RsfA (TIGR02894), RVT-GII, GIIM (pfam08388)

Seq: KB912882.1 Caldibacillus debilis DSM 16016 genomic scaffold A3EQDRAFT_scaffold_11.12, whole genome shotgun sequence (90611 bp)
Overview 1 RT 1: 87024-90544 bp Neighborhood of RT #1 [87024, 90544] Smc DUF2573 RVT-GII GIIM Feature: gene Location: 87024-87659 bp Feature: domain Description: Smc Location: 87168-87417 bp Feature: domain Description: Smc Location: 87168-87417 bp Feature: gene Location: 88121-88387 bp Feature: domain Description: DUF2573 Location: 88133-88358 bp Feature: domain Description: DUF2 573 Location: 88133-88358 bp Feature: gene Location: 88789-90051 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 88990-89608 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 88990-89608 bp Feature: domain Description: GIIM Note: maturase Location: 89656-89875 bp Feature: domain Description: GIIM Note: maturase Location: 89656-89875 bp Feature: gene Location: 90410-90544 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Smc (COG1196), DUF2573 (pfam10835), RVT-GII, GIIM (pfam08388)

Seq: KB912883.1 Caldibacillus debilis DSM 16016 genomic scaffold A3EQDRAFT_scaffold_12.13, whole genome shotgun sequence (86338 bp)
Overview 1 RT 1: 84178-86089 bp Neighborhood of RT #1 [84178, 86265] RVT-GII GIIM Feature: gene Location: 84178-84471 bp Feature: gene Location: 84677-84805 bp Feature: gene Location: 85003-86265 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 85204-85822 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 85204-85822 bp Feature: domain Description: GIIM Note: maturase Location: 85870-86089 bp Feature: domain Description: GIIM Note: maturase Location: 85870-86089 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: KB912901.1 Caldibacillus debilis DSM 16016 genomic scaffold A3EQDRAFT_scaffold_29.30, whole genome shotgun sequence (12161 bp)
Overview 1 RT 1: 74-2875 bp Neighborhood of RT #1 [74, 2919] RVT-GII GIIM YciA Feature: gene Location: 74-1336 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 275-893 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 275-893 bp Feature: domain Description: GIIM Note: maturase Location: 941-1160 bp Feature: domain Description: GIIM Note: maturase Location: 94 1-1160 bp Feature: gene Location: 1987-2127 bp Feature: gene Location: 2413-2919 bp Feature: domain Description: YciA Location: 2437-2875 bp Feature: domain Description: YciA Location: 24 37-2875 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT YciA (COG1607), RVT-GII, GIIM (pfam08388)