myRT

myRT report for GCA_000384115.1_ASM38411v1

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Seq: KB913029.1 Sporichthya polymorpha DSM 43042 genomic scaffold SpopoDRAFT_scaffold1.1, whole genome shotgun sequence (5500153 bp)
Overview 1 RT 1: 233762-237923 bp 2 RT 2: 522814-527994 bp Neighborhood of RT #1 [233762, 237976] INT_ICEBs1_C_like Transposase_mut RVT-GII GIIM Transposase_mut Transposase_mut Neighborhood of RT #2 [522814, 527994] excise COG3547 RVT-GII GIIM Feature: gene Location: 233762-234442 bp Feature: domain Description: INT_ICEBs1_C_like Location: 233834-234374 bp Feature: domain Description: INT_ICEBs1 _C_like Location: 233834-234374 bp Feature: gene Location: 234744-235076 bp Feature: domain Description: Transposase_mut Location: 234834-234957 bp Feature: domain Description: Transposase_mut Location: 234834-234957 bp Feature: gene Location: 235285-236532 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 235606-236293 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 235606-236293 bp Feature: domain Description: GIIM Note: maturase Location: 236365-236512 bp Feature: domain Description: GIIM Note: maturase Location: 236365-23651 2 bp Feature: gene Location: 237077-237529 bp Feature: domain Description: Transposase_mut Location: 237107-237461 bp Feature: domain Description: Transposase_mut Location: 2371 07-237461 bp Feature: gene Location: 237764-237976 bp Feature: domain Description: Transposase_mut Location: 237785-237923 bp Feature: domain Description: Transposase_mut Location: 237785-237923 bp Feature: gene Location: 522814-523041 bp Feature: domain Description: excise Location: 522886-523027 bp Feature: domain Description: excise Location: 522886-523027 bp Feature: gene Location: 523580-524752 bp Feature: domain Description: COG3547 Location: 523727-524612 bp Feature: domain Description: COG3547 Location: 523727-52461 2 bp Feature: gene Location: 524734-526164 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 525055-525739 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 525055-525739 bp Feature: domain Description: GIIM Note: maturase Location: 525817-526042 bp Feature: domain Description: GIIM Note: maturase Location: 52581 7-526042 bp Feature: gene Location: 526706-527080 bp Feature: gene Location: 527602-527994 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT INT_ICEBs1_C_like (cd01189), Transposase_mut (pfam00872), RVT-GII, GIIM (pfam08388), excise (TIGR01764), COG3547 (Transposase )