myRT

myRT report for GCA_000384275.1_ASM38427v1

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Seq: KB913036.1 Salinispora arenicola DSM 45545 strain CNS-991 genomic scaffold scaffold1, whole genome shotgun sequence (5867409 bp)
Overview 1 RT 1: 361598-367753 bp Neighborhood of RT #1 [361598, 367845] DUF4096 DDE_Tnp_1_2 RVT-GII GIIM TPR GGDEF Na_H_antiport_1 DsbG Feature: gene Location: 361598-362041 bp Feature: domain Description: DUF4096 Location: 361634-361850 bp Feature: domain Description: DUF4096 Location: 361 634-361 850 bp Feature: gene Location: 361759-362490 bp Feature: domain Description: DDE_Tnp_1_2 Location: 362203-362488 bp Feature: domain Description: DDE_Tnp_1 _2 Location: 362203-362488 bp Feature: gene Location: 362560-363573 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 362563-363121 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 362563-3631 21 bp Feature: domain Description: GIIM Note: maturase Location: 363181-363388 bp Feature: domain Description: GIIM Note: maturase Location: 3631 81 -363388 bp Feature: gene Location: 364192-365784 bp Feature: domain Description: TPR Location: 364603-364897 bp Feature: domain Description: TPR Location: 364603-364897 bp Feature: domain Description: GGDEF Location: 365317-365761 bp Feature: domain Description: GGDEF Location: 36531 7-365761 bp Feature: gene Location: 365869-367845 bp Feature: domain Description: Na_H_antiport_1 Location: 365968-367168 bp Feature: domain Description: Na_H_antiport_1 Location: 365968-3671 68 bp Feature: domain Description: DsbG Location: 367261-367753 bp Feature: domain Description: DsbG Location: 367261 -367753 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF4096 (pfam13340), DDE_Tnp_1_2 (pfam13586), RVT-GII, GIIM (pfam08388), TPR (smart00028), GGDEF (TIGR00254), Na_H_antiport_1 (pfam06965), DsbG (COG1651)