myRT

myRT report for GCA_000387805.2_ASM38780v2

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Seq: APNW01000022.1 Escherichia coli HM26 HM26_22, whole genome shotgun sequence (165923 bp)
Overview 1 RT 1: 22389-28632 bp Neighborhood of RT #1 [22389, 28769] Phage_integrase RVT-UG5 nitrilase AbiEi_3_N AbiEi_3 AbiEii Feature: gene Location: 22389-22655 bp Feature: domain Description: Phage_integrase Location: 22455-22551 bp Feature: domain Description: Phage_integrase Location: 22455-22551 bp Feature: gene Location: 22738-23208 bp Feature: gene Location: 23555-26764 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 24083-24572 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 24083-24572 bp Feature: domain Description: nitrilase Location: 26078-26675 bp Feature: domain Description: nitrilase Location: 26078-26675 bp Feature: gene Location: 27059-27862 bp Feature: domain Description: AbiEi_3_N Location: 27092-27353 bp Feature: domain Description: AbiEi_3_N Location: 27092-27353 bp Feature: domain Description: AbiEi_3 Location: 27365-27821 bp Feature: domain Description: AbiEi_3 Location: 27365-27821 bp Feature: gene Location: 27849-28769 bp Feature: domain Description: AbiEii Location: 27891-28632 bp Feature: domain Description: AbiEii Location: 27891 -28632 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Phage_integrase (pfam00589), RVT-UG5, nitrilase (cl11424), AbiEi_3_N (pfam17194), AbiEi_3 (pfam11459), AbiEii (pfam08843)

Seq: APNW01000044.1 Escherichia coli HM26 HM26_44, whole genome shotgun sequence (19004 bp)
Overview 1 RT 1: 15035-18116 bp Neighborhood of RT #1 [15035, 18116] RVT-GII RVT-GII GIIM Feature: gene Location: 15035-15208 bp Feature: gene Location: 15215-15520 bp Feature: gene Location: 15573-16016 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 15786-16014 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 15786-16014 bp Feature: gene Location: 16021-16839 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 16027-16399 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1602 7-16399 bp Feature: domain Description: GIIM Note: maturase Location: 16447-16669 bp Feature: domain Description: GIIM Note: maturase Location: 16447-16669 bp Feature: gene Location: 16962-17132 bp Feature: gene Location: 17919-18116 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)