myRT

myRT report for GCA_000390165.1_Whole_genome_shotgun_assembly

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Seq: ASAJ01000002.1 Vibrio gazogenes ATCC 43941 gazogenes_2, whole genome shotgun sequence (437996 bp)
Overview 1 RT 1: 44051-48077 bp Neighborhood of RT #1 [44051, 48077] VI_chp_8 RVT-UG4 Feature: gene Location: 44051-45190 bp Feature: domain Description: VI_chp_8 Location: 44117-45131 bp Feature: domain Description: VI_chp_8 Location: 441 1 7-451 31 bp Feature: gene Location: 45472-45771 bp Feature: gene Location: 45835-46902 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 46198-46666 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 461 98-46666 bp Feature: gene Location: 46989-47672 bp Feature: gene Location: 47856-48077 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT VI_chp_8 (TIGR03363), RVT-UG4

Seq: ASAJ01000003.1 Vibrio gazogenes ATCC 43941 gazogenes_3, whole genome shotgun sequence (332766 bp)
Overview 1 RT 1: 284760-288657 bp Neighborhood of RT #1 [284760, 288716] RVT-UG4 VI_chp_8 Feature: gene Location: 284760-285038 bp Feature: gene Location: 285095-285778 bp Feature: gene Location: 285865-286932 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 286228-286696 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 2 862 2 8-2 86696 bp Feature: gene Location: 286996-287295 bp Feature: gene Location: 287577-288716 bp Feature: domain Description: VI_chp_8 Location: 287643-288657 bp Feature: domain Description: VI_chp_8 Location: 2 87643-2 88657 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG4, VI_chp_8 (TIGR03363)

Seq: ASAJ01000013.1 Vibrio gazogenes ATCC 43941 gazogenes_13, whole genome shotgun sequence (187845 bp)
Overview 1 RT 1: 44051-48077 bp Neighborhood of RT #1 [44051, 48077] VI_chp_8 RVT-UG4 Feature: gene Location: 44051-45190 bp Feature: domain Description: VI_chp_8 Location: 44117-45131 bp Feature: domain Description: VI_chp_8 Location: 44117-4513 1 bp Feature: gene Location: 45472-45771 bp Feature: gene Location: 45835-46902 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 46198-46666 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 46198-46666 bp Feature: gene Location: 46989-47672 bp Feature: gene Location: 47856-48077 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT VI_chp_8 (TIGR03363), RVT-UG4

Seq: ASAJ01000015.1 Vibrio gazogenes ATCC 43941 gazogenes_15, whole genome shotgun sequence (167401 bp)
Overview 1 RT 1: 124882-131098 bp Neighborhood of RT #1 [124882, 131098] Cas2_I_II_III RVT-CRISPR Cas1_I-II-III DUF1874 Feature: gene Location: 124882-125043 bp Feature: gene Location: 125565-125858 bp Feature: domain Description: Cas2_I_II_III Location: 125589-125820 bp Feature: domain Description: Cas2_I_II_III Location: 125589-125820 bp Feature: gene Location: 125843-128860 bp Feature: RT Description: RVT-CRISPR Note: CRISPR RT Location: 126926-127520 bp Feature: RT Description: RVT-CRISPR Note: CRISPR RT Location: 126926-127520 bp Feature: domain Description: Cas1_I-II-III Location: 127910-128825 bp Feature: domain Description: Cas1_I-II-III Location: 127910-128825 bp Feature: gene Location: 128944-129285 bp Feature: domain Description: DUF1874 Location: 128968-129226 bp Feature: domain Description: DUF1874 Location: 128968-129226 bp Feature: gene Location: 129278-131098 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Cas2_I_II_III (cl11442), RVT-CRISPR, Cas1_I-II-III (cl00656), DUF1874 (pfam08960)