myRT

myRT report for GCA_000390185.1_Lulo1

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Seq: AQHR01000119.1 Lunatimonas lonarensis strain AK24 S14_contig_85, whole genome shotgun sequence (3742 bp)
Overview 1 RT 1: 106-2882 bp Neighborhood of RT #1 [106, 3067] AAA_21 DUF4435 RVT-GII GIIM Feature: gene Location: 106-816 bp Feature: domain Description: AAA_21 Location: 217-769 bp Feature: domain Description: AAA_21 Location: 21 7-769 bp Feature: gene Location: 825-1694 bp Feature: domain Description: DUF4435 Location: 888-1311 bp Feature: domain Description: DUF4435 Location: 888-1 31 1 bp Feature: gene Location: 1787-3067 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1982-2597 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 982-2597 bp Feature: domain Description: GIIM Note: maturase Location: 2672-2882 bp Feature: domain Description: GIIM Note: maturase Location: 2672-2882 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT AAA_21 (pfam13304), RVT-GII, GIIM (pfam08388), DUF4435 (pfam14491)

Seq: AQHR01000039.1 Lunatimonas lonarensis strain AK24 S14_contig_118, whole genome shotgun sequence (3507 bp)
Overview 1 RT 1: 1-3069 bp Neighborhood of RT #1 [1, 3074] DDE_Tnp_IS66_C GIIM RVT-GII COG1569 Feature: gene Location: 1-159 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 13-127 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 13-12 7 bp Feature: gene Location: 231-899 bp Feature: domain Description: GIIM Note: maturase Location: 756-861 bp Feature: domain Description: GIIM Note: maturase Location: 756-861 bp Feature: gene Location: 1094-1525 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1322-1511 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 132 2 -1511 bp Feature: gene Location: 2486-2677 bp Feature: gene Location: 2739-3074 bp Feature: domain Description: COG1569 Location: 2751-3069 bp Feature: domain Description: COG1569 Location: 2 751-3069 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, DDE_Tnp_IS66_C (pfam13817), GIIM (pfam08388), COG1569 (Predicted nucleic acid-binding protein, contains PIN domain )