myRT

myRT report for GCA_000390785.1_Ente_faec_7330245-2_V1

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Seq: KB932377.1 Enterococcus faecalis 7330245-2 genomic scaffold acHWz-supercont1.2, whole genome shotgun sequence (761425 bp)
Overview 1 RT 1: 553845-560107 bp 2 RT 2: 569982-578570 bp Neighborhood of RT #1 [553845, 560130] Sipho_Gp157 PRK07983 RVT-GII GIIM DUF4373 DnaD_dom phage_arpU Neighborhood of RT #2 [569982, 578686] TraC-F-type Phage_lysozyme2 PRK08581 RVT-GII DHR10 Feature: gene Location: 553845-554324 bp Feature: domain Description: Sipho_Gp157 Location: 553854-554322 bp Feature: domain Description: Sipho_Gp1 57 Location: 553854-554322 bp Feature: gene Location: 554337-555320 bp Feature: domain Description: PRK07983 Location: 554649-554991 bp Feature: domain Description: PRK07983 Location: 554649-554991 bp Feature: gene Location: 555910-557232 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 556210-556846 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 55621 0-556846 bp Feature: domain Description: GIIM Note: maturase Location: 556918-557134 bp Feature: domain Description: GIIM Note: maturase Location: 55691 8-5571 34 bp Feature: gene Location: 557414-558382 bp Feature: domain Description: DUF4373 Location: 557447-557726 bp Feature: domain Description: DUF4373 Location: 557447-557726 bp Feature: domain Description: DnaD_dom Location: 557993-558197 bp Feature: domain Description: DnaD_dom Location: 557993-5581 97 bp Feature: gene Location: 559714-560130 bp Feature: domain Description: phage_arpU Location: 559726-560107 bp Feature: domain Description: phage_arpU Location: 559726-5601 07 bp Feature: gene Location: 569982-572372 bp Feature: domain Description: TraC-F-type Location: 570402-572196 bp Feature: domain Description: TraC-F-type Location: 570402-5721 96 bp Feature: gene Location: 572384-574897 bp Feature: domain Description: Phage_lysozyme2 Location: 574016-574541 bp Feature: domain Description: Phage_lysozyme2 Location: 57401 6-574541 bp Feature: domain Description: PRK08581 Location: 574661-574880 bp Feature: domain Description: PRK08581 Location: 574661 -574880 bp Feature: gene Location: 575621-577555 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 575945-576680 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 575945-576680 bp Feature: gene Location: 577828-578454 bp Feature: gene Location: 578441-578686 bp Feature: domain Description: DHR10 Location: 578453-578570 bp Feature: domain Description: DHR1 0 Location: 578453-578570 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Sipho_Gp157 (pfam05565), PRK07983 (exodeoxyribonuclease X; Provisional), RVT-GII, GIIM (pfam08388), DUF4373 (pfam14297), DnaD_dom (TIGR01446), phage_arpU (TIGR01637), TraC-F-type (TIGR02746), Phage_lysozyme2 (pfam18013), PRK08581 (amidase domain-containing protein)
DHR10 (pfam18595)

Seq: KB932379.1 Enterococcus faecalis 7330245-2 genomic scaffold acHWz-supercont1.6, whole genome shotgun sequence (612849 bp)
Overview 1 RT 1: 219261-225008 bp Neighborhood of RT #1 [219261, 225037] RVT-Retrons sufB Feature: gene Location: 219261-219914 bp Feature: gene Location: 219985-221241 bp Feature: gene Location: 221326-222318 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 221452-222007 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 2 2 1452 -2 2 2 007 bp Feature: gene Location: 222305-222586 bp Feature: gene Location: 223643-225037 bp Feature: domain Description: sufB Location: 223670-225008 bp Feature: domain Description: sufB Location: 2 2 3670-2 2 5008 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-Retrons, sufB (TIGR01980)