myRT

myRT report for GCA_000391745.1_Ente_faec_109_A1_V1

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Seq: KB932609.1 Enterococcus faecium 109 A1 genomic scaffold acHXH-supercont1.7, whole genome shotgun sequence (222064 bp)
Overview 1 RT 1: 37317-41943 bp 2 RT 2: 206535-212878 bp Neighborhood of RT #1 [37317, 41966] PRK07726 RVT-GII HNHc PRK07726 PinE Neighborhood of RT #2 [206535, 212895] PglZ RVT-UG2 Rve ROK Feature: gene Location: 37317-37814 bp Feature: gene Location: 38110-38370 bp Ori: EOF51635.1 Feature: domain Description: PRK07726 Location: 38116-38356 bp Feature: domain Description: PRK07726 Location: 381 1 6-38356 bp Feature: gene Location: 38589-40475 bp Ori: EOF51636.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 38904-39642 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 38904-39642 bp Feature: domain Description: HNHc Note: nucleases Location: 40191-40359 bp Feature: domain Description: HNHc Note: nucleases Location: 401 91 -40359 bp Feature: gene Location: 41212-41574 bp Ori: EOF51637.1 Feature: domain Description: PRK07726 Location: 41221-41554 bp Feature: domain Description: PRK07726 Location: 41 221 -41 554 bp Feature: gene Location: 41574-41966 bp Ori: EOF51638.1 Feature: domain Description: PinE Location: 41676-41943 bp Feature: domain Description: PinE Location: 41 676-41 943 bp Feature: gene Location: 206535-208067 bp Ori: EOF50883.1 Feature: domain Description: PglZ Location: 207273-207777 bp Feature: domain Description: PglZ Location: 207273-207777 bp Feature: gene Location: 208068-208775 bp Feature: gene Location: 209489-210646 bp Ori: EOF50885.1 Feature: RT Description: RVT-UG2 Note: UG2 RT Location: 209717-210557 bp Feature: RT Description: RVT-UG2 Note: UG2 RT Location: 20971 7-21 0557 bp Feature: gene Location: 210680-211360 bp Ori: EOF50886.1 Feature: domain Description: Rve Location: 210683-211331 bp Feature: domain Description: Rve Location: 21 0683-21 1 331 bp Feature: gene Location: 212023-212895 bp Ori: EOF50887.1 Feature: domain Description: ROK Location: 212032-212878 bp Feature: domain Description: ROK Location: 21 2032-21 2878 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK07726 (DNA topoisomerase 3), RVT-GII, HNHc (smart00507), PinE (COG1961), PglZ (pfam08665), RVT-UG2, Rve (COG3316), ROK (pfam00480)