myRT

myRT report for GCA_000392915.1_Ente_faec_D3_V1

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Seq: KB944617.1 Enterococcus faecalis D3 genomic scaffold acHXN-supercont1.6, whole genome shotgun sequence (612014 bp)
Overview 1 RT 1: 220199-225946 bp Neighborhood of RT #1 [220199, 225975] RVT-Retrons sufB Feature: gene Location: 220199-220852 bp Feature: gene Location: 220923-222179 bp Feature: gene Location: 222264-223256 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 222390-222945 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 222390-222945 bp Feature: gene Location: 223243-223524 bp Feature: gene Location: 224581-225975 bp Feature: domain Description: sufB Location: 224608-225946 bp Feature: domain Description: sufB Location: 224608-225946 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-Retrons, sufB (TIGR01980)

Seq: KB944614.1 Enterococcus faecalis D3 genomic scaffold acHXN-supercont1.3, whole genome shotgun sequence (306643 bp)
Overview 1 RT 1: 966-7228 bp 2 RT 2: 17103-25691 bp Neighborhood of RT #1 [966, 7251] Sipho_Gp157 PRK07983 RVT-GII GIIM DUF4373 DnaD_dom phage_arpU Neighborhood of RT #2 [17103, 25807] TraC-F-type Phage_lysozyme2 PRK08581 RVT-GII DHR10 Feature: gene Location: 966-1445 bp Feature: domain Description: Sipho_Gp157 Location: 975-1443 bp Feature: domain Description: Sipho_Gp157 Location: 975-1443 bp Feature: gene Location: 1458-2441 bp Feature: domain Description: PRK07983 Location: 1770-2112 bp Feature: domain Description: PRK07983 Location: 1770-2 112 bp Feature: gene Location: 3031-4353 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3331-3967 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3331-3967 bp Feature: domain Description: GIIM Note: maturase Location: 4039-4255 bp Feature: domain Description: GIIM Note: maturase Location: 4039-42 55 bp Feature: gene Location: 4535-5503 bp Feature: domain Description: DUF4373 Location: 4568-4847 bp Feature: domain Description: DUF4373 Location: 4568-4847 bp Feature: domain Description: DnaD_dom Location: 5114-5318 bp Feature: domain Description: DnaD_dom Location: 5114-5318 bp Feature: gene Location: 6835-7251 bp Feature: domain Description: phage_arpU Location: 6847-7228 bp Feature: domain Description: phage_arpU Location: 6847-72 2 8 bp Feature: gene Location: 17103-19493 bp Feature: domain Description: TraC-F-type Location: 17523-19317 bp Feature: domain Description: TraC-F-type Location: 1752 3-19317 bp Feature: gene Location: 19505-22018 bp Feature: domain Description: Phage_lysozyme2 Location: 21137-21662 bp Feature: domain Description: Phage_lysozyme2 Location: 2 1137-2 1662 bp Feature: domain Description: PRK08581 Location: 21782-22001 bp Feature: domain Description: PRK08581 Location: 2 1782 -2 2 001 bp Feature: gene Location: 22742-24676 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 23066-23801 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 3066-2 3801 bp Feature: gene Location: 24949-25575 bp Feature: gene Location: 25562-25807 bp Feature: domain Description: DHR10 Location: 25574-25691 bp Feature: domain Description: DHR10 Location: 2 5574-2 5691 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK07983 (exodeoxyribonuclease X; Provisional), RVT-GII, GIIM (pfam08388), DUF4373 (pfam14297), DnaD_dom (TIGR01446), phage_arpU (TIGR01637), TraC-F-type (TIGR02746), Phage_lysozyme2 (pfam18013), PRK08581 (amidase domain-containing protein), DHR10 (pfam18595)