myRT

myRT report for GCA_000394575.1_Ente_faec_UAA949_V1

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Seq: KB946809.1 Enterococcus faecium UAA949 genomic scaffold acEPd-supercont1.10, whole genome shotgun sequence (1201187 bp)
Overview 1 RT 1: 805600-812282 bp Neighborhood of RT #1 [805600, 812359] PHP_HisPPase SMC_prok_B SMC_prok_B ArdA RVT-GII HNHc DUF3789 HTH_XRE Rol_Rep_N Rep_trans Feature: gene Location: 805600-807447 bp Ori: EOL72060.1 Feature: domain Description: PHP_HisPPase Location: 805627-806104 bp Feature: domain Description: PHP_HisPPase Location: 805627-8061 04 bp Feature: domain Description: SMC_prok_B Location: 806506-806605 bp Feature: domain Description: SMC_prok_B Location: 806506-806605 bp Feature: domain Description: SMC_prok_B Location: 806935-807370 bp Feature: domain Description: SMC_prok_B Location: 806935-807370 bp Feature: gene Location: 807544-808044 bp Ori: EOL72061.1 Feature: domain Description: ArdA Location: 807562-808033 bp Feature: domain Description: ArdA Location: 807562-808033 bp Feature: gene Location: 808385-810295 bp Ori: EOL72062.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 808718-809456 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 80871 8-809456 bp Feature: domain Description: HNHc Note: nucleases Location: 810011-810176 bp Feature: domain Description: HNHc Note: nucleases Location: 81 001 1 -81 01 76 bp Feature: gene Location: 811041-811178 bp Ori: EOL72063.1 Feature: domain Description: DUF3789 Location: 811068-811161 bp Feature: domain Description: DUF3789 Location: 81 1 068-81 1 1 61 bp Feature: gene Location: 811175-812359 bp Ori: EOL72064.1 Feature: domain Description: HTH_XRE Location: 811205-811349 bp Feature: domain Description: HTH_XRE Location: 81 1 205-81 1 349 bp Feature: domain Description: Rol_Rep_N Location: 811382-811646 bp Feature: domain Description: Rol_Rep_N Location: 81 1 382-81 1 646 bp Feature: domain Description: Rep_trans Location: 811670-812282 bp Feature: domain Description: Rep_trans Location: 81 1 670-81 2282 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PHP_HisPPase (cd07432), SMC_prok_B (TIGR02168), ArdA (pfam07275), RVT-GII, HNHc (smart00507), DUF3789 (pfam12664), HTH_XRE (smart00530), Rol_Rep_N (pfam18106), Rep_trans (pfam02486)

Seq: KB946828.1 Enterococcus faecium UAA949 genomic scaffold acEPd-supercont1.9, whole genome shotgun sequence (122647 bp)
Overview 1 RT 1: 151-4001 bp Neighborhood of RT #1 [151, 4078] RVT-GII HNHc DUF3789 HTH_XRE Rol_Rep_N Rep_trans Feature: gene Location: 151-2061 bp Ori: EOL72959.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 484-1222 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 484-12 2 2 bp Feature: domain Description: HNHc Note: nucleases Location: 1777-1942 bp Feature: domain Description: HNHc Note: nucleases Location: 1777-1942 bp Feature: gene Location: 2799-2897 bp Ori: EOL72960.1 Feature: domain Description: DUF3789 Location: 2817-2877 bp Feature: domain Description: DUF3789 Location: 2 817-2 877 bp Feature: gene Location: 2894-4078 bp Ori: EOL72961.1 Feature: domain Description: HTH_XRE Location: 2924-3068 bp Feature: domain Description: HTH_XRE Location: 2 92 4-3068 bp Feature: domain Description: Rol_Rep_N Location: 3101-3365 bp Feature: domain Description: Rol_Rep_N Location: 3101-3365 bp Feature: domain Description: Rep_trans Location: 3389-4001 bp Feature: domain Description: Rep_trans Location: 3389-4001 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, HNHc (smart00507), DUF3789 (pfam12664), HTH_XRE (smart00530), Rol_Rep_N (pfam18106), Rep_trans (pfam02486)

Seq: KB946814.1 Enterococcus faecium UAA949 genomic scaffold acEPd-supercont1.15, whole genome shotgun sequence (14460 bp)
Overview 1 RT 1: 1-4104 bp Neighborhood of RT #1 [1, 4133] RVT-AbiP2 HsdM Rve Feature: gene Location: 1-223 bp Feature: gene Location: 201-1676 bp Ori: EOL70507.1 Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 549-1014 bp Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 549-1014 bp Feature: gene Location: 2014-3423 bp Ori: EOL70508.1 Feature: domain Description: HsdM Location: 2035-3397 bp Feature: domain Description: HsdM Location: 203 5-3 3 97 bp Feature: gene Location: 3453-4133 bp Ori: EOL70509.1 Feature: domain Description: Rve Location: 3456-4104 bp Feature: domain Description: Rve Location: 3 456-4104 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-AbiP2, HsdM (COG0286), Rve (COG3316)

Seq: KB946822.1 Enterococcus faecium UAA949 genomic scaffold acEPd-supercont1.3, whole genome shotgun sequence (102347 bp)
Overview 1 RT 1: 98100-101508 bp Neighborhood of RT #1 [98100, 101627] ArdA RVT-GII HNHc Feature: gene Location: 98100-98804 bp Feature: gene Location: 98874-99377 bp Ori: EOL75702.1 Feature: domain Description: ArdA Location: 98892-99363 bp Feature: domain Description: ArdA Location: 98892-99363 bp Feature: gene Location: 99717-101627 bp Ori: EOL75703.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 100050-100788 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 100050-100788 bp Feature: domain Description: HNHc Note: nucleases Location: 101343-101508 bp Feature: domain Description: HNHc Note: nucleases Location: 10134 3-101508 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT ArdA (pfam07275), RVT-GII, HNHc (smart00507)