myRT

myRT report for GCA_000394595.1_Ente_faec_UAA950_V1

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Seq: KB946830.1 Enterococcus faecium UAA950 genomic scaffold acEPV-supercont1.10, whole genome shotgun sequence (1524516 bp)
Overview 1 RT 1: 803464-810146 bp Neighborhood of RT #1 [803464, 810223] PHP_HisPPase SMC_prok_B SMC_prok_B ArdA RVT-GII HNHc DUF3789 HTH_XRE Rol_Rep_N Rep_trans Feature: gene Location: 803464-805311 bp Ori: EOI53131.1 Feature: domain Description: PHP_HisPPase Location: 803491-803968 bp Feature: domain Description: PHP_HisPPase Location: 803491 -803968 bp Feature: domain Description: SMC_prok_B Location: 804370-804469 bp Feature: domain Description: SMC_prok_B Location: 804370-804469 bp Feature: domain Description: SMC_prok_B Location: 804799-805234 bp Feature: domain Description: SMC_prok_B Location: 804799-805234 bp Feature: gene Location: 805408-805908 bp Ori: EOI53132.1 Feature: domain Description: ArdA Location: 805426-805897 bp Feature: domain Description: ArdA Location: 805426-805897 bp Feature: gene Location: 806249-808159 bp Ori: EOI53133.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 806582-807320 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 806582-807320 bp Feature: domain Description: HNHc Note: nucleases Location: 807875-808040 bp Feature: domain Description: HNHc Note: nucleases Location: 807875-808040 bp Feature: gene Location: 808905-809042 bp Ori: EOI53134.1 Feature: domain Description: DUF3789 Location: 808932-809025 bp Feature: domain Description: DUF3789 Location: 808932-809025 bp Feature: gene Location: 809039-810223 bp Ori: EOI53135.1 Feature: domain Description: HTH_XRE Location: 809069-809213 bp Feature: domain Description: HTH_XRE Location: 809069-80921 3 bp Feature: domain Description: Rol_Rep_N Location: 809246-809510 bp Feature: domain Description: Rol_Rep_N Location: 809246-80951 0 bp Feature: domain Description: Rep_trans Location: 809534-810146 bp Feature: domain Description: Rep_trans Location: 809534-81 01 46 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PHP_HisPPase (cd07432), SMC_prok_B (TIGR02168), ArdA (pfam07275), RVT-GII, HNHc (smart00507), DUF3789 (pfam12664), HTH_XRE (smart00530), Rol_Rep_N (pfam18106), Rep_trans (pfam02486)

Seq: KB946851.1 Enterococcus faecium UAA950 genomic scaffold acEPV-supercont1.5, whole genome shotgun sequence (225369 bp)
Overview 1 RT 1: 99275-104742 bp Neighborhood of RT #1 [99275, 104819] ArdA RVT-GII HNHc DUF3789 HTH_XRE Rol_Rep_N Rep_trans Feature: gene Location: 99275-99979 bp Feature: gene Location: 100049-100552 bp Ori: EOI56552.1 Feature: domain Description: ArdA Location: 100067-100538 bp Feature: domain Description: ArdA Location: 100067-100538 bp Feature: gene Location: 100892-102802 bp Ori: EOI56553.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 101225-101963 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1012 2 5-101963 bp Feature: domain Description: HNHc Note: nucleases Location: 102518-102683 bp Feature: domain Description: HNHc Note: nucleases Location: 102 518-102 683 bp Feature: gene Location: 103540-103638 bp Ori: EOI56554.1 Feature: domain Description: DUF3789 Location: 103558-103618 bp Feature: domain Description: DUF3789 Location: 103558-103618 bp Feature: gene Location: 103635-104819 bp Ori: EOI56555.1 Feature: domain Description: HTH_XRE Location: 103665-103809 bp Feature: domain Description: HTH_XRE Location: 103665-103809 bp Feature: domain Description: Rol_Rep_N Location: 103842-104106 bp Feature: domain Description: Rol_Rep_N Location: 103842 -104106 bp Feature: domain Description: Rep_trans Location: 104130-104742 bp Feature: domain Description: Rep_trans Location: 104130-104742 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT ArdA (pfam07275), RVT-GII, HNHc (smart00507), DUF3789 (pfam12664), HTH_XRE (smart00530), Rol_Rep_N (pfam18106), Rep_trans (pfam02486)

Seq: KB946839.1 Enterococcus faecium UAA950 genomic scaffold acEPV-supercont1.19, whole genome shotgun sequence (3411 bp)
Overview 1 RT 1: 63-2692 bp Neighborhood of RT #1 [63, 3354] HsdM RVT-AbiP2 Feature: gene Location: 63-1541 bp Ori: EOI51338.1 Feature: domain Description: HsdM Location: 84-1509 bp Feature: domain Description: HsdM Location: 84-1509 bp Feature: gene Location: 1879-3354 bp Ori: EOI51339.1 Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 2227-2692 bp Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 2227-2692 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HsdM (COG0286), RVT-AbiP2