myRT

myRT report for GCA_000395345.1_CupWS1.0

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Seq: AQPL01000077.1 Cupriavidus sp. WS contig83_scaffold13, whole genome shotgun sequence (62281 bp)
Overview 1 RT 1: 50623-56118 bp Neighborhood of RT #1 [50623, 56126] Avd_like RVT-DGRs XerC PRK15041 Feature: gene Location: 50623-51102 bp Feature: gene Location: 51155-51517 bp Feature: domain Description: Avd_like Location: 51182-51494 bp Feature: domain Description: Avd_like Location: 51 1 82-51 494 bp Feature: gene Location: 51477-52949 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 51996-52752 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 51 996-52752 bp Feature: gene Location: 53165-54352 bp Feature: domain Description: XerC Location: 53483-54200 bp Feature: domain Description: XerC Location: 53483-54200 bp Feature: gene Location: 54585-56126 bp Feature: domain Description: PRK15041 Location: 55020-56118 bp Feature: domain Description: PRK1 5041 Location: 55020-561 1 8 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Avd_like (cd16376), RVT-DGRs, XerC (COG4973), PRK15041 (methyl-accepting chemotaxis protein)

Seq: AQPL01000142.1 Cupriavidus sp. WS contig159_scaffold26, whole genome shotgun sequence (24307 bp)
Overview 1 RT 1: 7978-16591 bp Neighborhood of RT #1 [7978, 16602] Spr RssA RVT_N RVT-GII GIIM HNHc gltX MATE_NorM_like Feature: gene Location: 7978-8667 bp Feature: domain Description: Spr Location: 8182-8554 bp Feature: domain Description: Spr Location: 8182 -8554 bp Feature: gene Location: 8812-9753 bp Feature: domain Description: RssA Location: 8935-9715 bp Feature: domain Description: RssA Location: 8935-9715 bp Feature: gene Location: 11102-12802 bp Feature: RT Description: RVT_N Location: 11159-11402 bp Feature: RT Description: RVT_N Location: 11159-11402 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 11447-12095 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 11447-12 095 bp Feature: domain Description: GIIM Note: maturase Location: 12149-12380 bp Feature: domain Description: GIIM Note: maturase Location: 12 149-12 380 bp Feature: domain Description: HNHc Note: nucleases Location: 12599-12764 bp Feature: domain Description: HNHc Note: nucleases Location: 12 599-12 764 bp Feature: gene Location: 12947-14353 bp Feature: domain Description: gltX Location: 12953-14342 bp Feature: domain Description: gltX Location: 12 953-14342 bp Feature: gene Location: 15250-16602 bp Feature: domain Description: MATE_NorM_like Location: 15271-16591 bp Feature: domain Description: MATE_NorM_like Location: 152 71-16591 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNHc (smart00507), gltX (PRK14895), MATE_NorM_like (cd13137), RssA (COG1752)