myRT

myRT report for GCA_000395365.1_Ente_faec_SF5039_V1

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Seq: KB947470.1 Enterococcus faecalis SF5039 genomic scaffold acyrU-supercont1.12, whole genome shotgun sequence (438303 bp)
Overview 1 RT 1: 273410-286876 bp Neighborhood of RT #1 [273410, 286876] DUF3991 Toprim_2 COG4646 HELICc COG2433 RVT-GII Intron_maturas2 MutS_I YtxK COG4646 Feature: gene Location: 273410-274363 bp Feature: domain Description: DUF3991 Location: 273773-273974 bp Feature: domain Description: DUF3991 Location: 273773-273974 bp Feature: domain Description: Toprim_2 Location: 274010-274307 bp Feature: domain Description: Toprim_2 Location: 27401 0-274307 bp Feature: gene Location: 274765-276618 bp Feature: domain Description: COG4646 Location: 274786-275194 bp Feature: domain Description: COG4646 Location: 274786-2751 94 bp Feature: domain Description: HELICc Location: 275221-275608 bp Feature: domain Description: HELICc Location: 275221 -275608 bp Feature: domain Description: COG2433 Location: 276214-276460 bp Feature: domain Description: COG2433 Location: 27621 4-276460 bp Feature: gene Location: 276684-278510 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 276948-277779 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 276948-277779 bp Feature: domain Description: Intron_maturas2 Location: 277869-278160 bp Feature: domain Description: Intron_maturas2 Location: 277869-2781 60 bp Feature: gene Location: 279122-286393 bp Feature: domain Description: MutS_I Location: 282605-282845 bp Feature: domain Description: MutS_I Location: 282605-282845 bp Feature: domain Description: YtxK Location: 283361-284111 bp Feature: domain Description: YtxK Location: 283361 -2841 1 1 bp Feature: domain Description: COG4646 Location: 284183-286382 bp Feature: domain Description: COG4646 Location: 2841 83-286382 bp Feature: gene Location: 286463-286876 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF3991 (pfam13154), Toprim_2 (pfam13155), COG4646 (Adenine-specific DNA methylase, N12 class ), HELICc (smart00490), COG2433 (Possible nuclease of RNase H fold, RuvC/YqgF family ), RVT-GII, Intron_maturas2 (pfam01348), MutS_I (pfam01624), YtxK (COG0827)

Seq: KB947479.1 Enterococcus faecalis SF5039 genomic scaffold acyrU-supercont1.4, whole genome shotgun sequence (247201 bp)
Overview 1 RT 1: 171363-175251 bp Neighborhood of RT #1 [171363, 175337] DNA_binding_1 DHFR RVT-GII Polyketide_cyc2 TfoX Feature: gene Location: 171363-171842 bp Feature: domain Description: DNA_binding_1 Location: 171513-171762 bp Feature: domain Description: DNA_binding_1 Location: 171513-171762 bp Feature: gene Location: 172150-172644 bp Feature: domain Description: DHFR Location: 172159-172597 bp Feature: domain Description: DHFR Location: 172 159-172 597 bp Feature: gene Location: 173189-174484 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 173444-174134 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 173444-174134 bp Feature: gene Location: 174595-174990 bp Feature: domain Description: Polyketide_cyc2 Location: 174634-174988 bp Feature: domain Description: Polyketide_cyc2 Location: 174634-174988 bp Feature: gene Location: 175017-175337 bp Feature: domain Description: TfoX Location: 175020-175251 bp Feature: domain Description: TfoX Location: 17502 0-1752 51 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DNA_binding_1 (pfam01035), DHFR (cl17279), RVT-GII, Polyketide_cyc2 (pfam10604), TfoX (COG3070)

Seq: KB947484.1 Enterococcus faecalis SF5039 genomic scaffold acyrU-supercont1.9, whole genome shotgun sequence (1324478 bp)
Overview 1 RT 1: 736449-740793 bp Neighborhood of RT #1 [736449, 740804] FtsK HNHc RVT-GII FtsK_SpoIIIE RelB_DinJ Feature: gene Location: 736449-736805 bp Feature: domain Description: FtsK Location: 736464-736701 bp Feature: domain Description: FtsK Location: 73 6464-73 6701 bp Feature: gene Location: 736907-737566 bp Feature: domain Description: HNHc Note: nucleases Location: 737285-737453 bp Feature: domain Description: HNHc Note: nucleases Location: 73 7285-73 7453 bp Feature: gene Location: 737566-738780 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 737932-738631 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 73 793 2-73 863 1 bp Feature: gene Location: 739374-740390 bp Feature: domain Description: FtsK_SpoIIIE Location: 740025-740268 bp Feature: domain Description: FtsK_SpoIIIE Location: 740025-740268 bp Feature: gene Location: 740460-740804 bp Feature: domain Description: RelB_DinJ Location: 740670-740793 bp Feature: domain Description: RelB_DinJ Location: 740670-740793 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT FtsK (COG1674), HNHc (smart00507), RVT-GII, FtsK_SpoIIIE (pfam01580), RelB_DinJ (TIGR02384)