myRT

myRT report for GCA_000395465.1_Ente_faec_UAA715_V1

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Seq: KB947546.1 Enterococcus faecium UAA715 genomic scaffold acAqL-supercont1.14, whole genome shotgun sequence (67780 bp)
Overview 1 RT 1: 1-3899 bp Neighborhood of RT #1 [1, 3907] RVT-GII HNHc PRK07726 InsE Feature: gene Location: 1-335 bp Feature: gene Location: 1072-2958 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1387-2125 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 387-21 25 bp Feature: domain Description: HNHc Note: nucleases Location: 2674-2842 bp Feature: domain Description: HNHc Note: nucleases Location: 2674-2842 bp Feature: gene Location: 3175-3576 bp Feature: domain Description: PRK07726 Location: 3181-3439 bp Feature: domain Description: PRK07726 Location: 31 81 -3439 bp Feature: gene Location: 3617-3907 bp Feature: domain Description: InsE Location: 3620-3899 bp Feature: domain Description: InsE Location: 3620-3899 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, HNHc (smart00507), InsE (COG2963)

Seq: KB947567.1 Enterococcus faecium UAA715 genomic scaffold acAqL-supercont1.9, whole genome shotgun sequence (33504 bp)
Overview 1 RT 1: 9325-14755 bp Neighborhood of RT #1 [9325, 14760] PinE PinE RVT-GII InsE HTH_LacI PBP1_Qymf_like Feature: gene Location: 9325-9948 bp Feature: domain Description: PinE Location: 9331-9931 bp Feature: domain Description: PinE Location: 9331-9931 bp Feature: gene Location: 10181-10603 bp Feature: domain Description: PinE Location: 10208-10580 bp Feature: domain Description: PinE Location: 102 08-10580 bp Feature: gene Location: 11701-12186 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 12016-12184 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 12 016-12 184 bp Feature: gene Location: 12486-12740 bp Feature: domain Description: InsE Location: 12492-12732 bp Feature: domain Description: InsE Location: 12 492 -12 732 bp Feature: gene Location: 13798-14760 bp Feature: domain Description: HTH_LacI Location: 13819-13966 bp Feature: domain Description: HTH_LacI Location: 13819-13966 bp Feature: domain Description: PBP1_Qymf_like Location: 13984-14755 bp Feature: domain Description: PBP1_Qymf_like Location: 13984-14755 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PinE (COG1961), RVT-GII, InsE (COG2963), HTH_LacI (cd01392), PBP1_Qymf_like