myRT

myRT report for GCA_000395645.1_Ente_faec_UAA725_V1

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Seq: KB947792.1 Enterococcus faecium UAA725 genomic scaffold acEQS-supercont1.10, whole genome shotgun sequence (136547 bp)
Overview 1 RT 1: 119649-124493 bp Neighborhood of RT #1 [119649, 124522] PRK07726 RVT-GII HNHc PRK07726 PinE Feature: gene Location: 119649-120146 bp Feature: gene Location: 120442-120702 bp Feature: domain Description: PRK07726 Location: 120448-120688 bp Feature: domain Description: PRK07726 Location: 1 20448-1 20688 bp Feature: gene Location: 120919-122805 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 121234-121972 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 21 234-1 21 972 bp Feature: domain Description: HNHc Note: nucleases Location: 122521-122689 bp Feature: domain Description: HNHc Note: nucleases Location: 1 22521 -1 22689 bp Feature: gene Location: 123542-123904 bp Feature: domain Description: PRK07726 Location: 123551-123884 bp Feature: domain Description: PRK07726 Location: 1 23551 -1 23884 bp Feature: gene Location: 123920-124522 bp Feature: domain Description: PinE Location: 123923-124493 bp Feature: domain Description: PinE Location: 1 23923-1 24493 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK07726 (DNA topoisomerase 3), RVT-GII, HNHc (smart00507), PinE (COG1961)

Seq: KB947795.1 Enterococcus faecium UAA725 genomic scaffold acEQS-supercont1.13, whole genome shotgun sequence (844748 bp)
Overview 1 RT 1: 805503-812185 bp Neighborhood of RT #1 [805503, 812262] PHP_HisPPase SMC_prok_B SMC_prok_B ArdA RVT-GII HNHc DUF3789 HTH_XRE Rol_Rep_N Rep_trans Feature: gene Location: 805503-807350 bp Feature: domain Description: PHP_HisPPase Location: 805530-806007 bp Feature: domain Description: PHP_HisPPase Location: 805530-806007 bp Feature: domain Description: SMC_prok_B Location: 806409-806508 bp Feature: domain Description: SMC_prok_B Location: 806409-806508 bp Feature: domain Description: SMC_prok_B Location: 806838-807273 bp Feature: domain Description: SMC_prok_B Location: 806838-8072 73 bp Feature: gene Location: 807447-807947 bp Feature: domain Description: ArdA Location: 807465-807936 bp Feature: domain Description: ArdA Location: 807465-807936 bp Feature: gene Location: 808288-810198 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 808621-809359 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 80862 1-809359 bp Feature: domain Description: HNHc Note: nucleases Location: 809914-810079 bp Feature: domain Description: HNHc Note: nucleases Location: 809914-810079 bp Feature: gene Location: 810944-811081 bp Feature: domain Description: DUF3789 Location: 810971-811064 bp Feature: domain Description: DUF3789 Location: 810971-811064 bp Feature: gene Location: 811078-812262 bp Feature: domain Description: HTH_XRE Location: 811108-811252 bp Feature: domain Description: HTH_XRE Location: 811108-8112 52 bp Feature: domain Description: Rol_Rep_N Location: 811285-811549 bp Feature: domain Description: Rol_Rep_N Location: 8112 85-811549 bp Feature: domain Description: Rep_trans Location: 811573-812185 bp Feature: domain Description: Rep_trans Location: 811573-812 185 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PHP_HisPPase (cd07432), SMC_prok_B (TIGR02168), ArdA (pfam07275), RVT-GII, HNHc (smart00507), DUF3789 (pfam12664), HTH_XRE (smart00530), Rol_Rep_N (pfam18106), Rep_trans (pfam02486)