myRT

myRT report for GCA_000395825.1_Ente_faec_VRE_108_V1

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Seq: KB948017.1 Enterococcus faecium VRE 108 genomic scaffold acEQV-supercont1.13, whole genome shotgun sequence (236691 bp)
Overview 1 RT 1: 98258-103448 bp Neighborhood of RT #1 [98258, 103525] TcpE ArdA RVT-GII HNHc DUF3789 HTH_XRE Rol_Rep_N Rep_trans Feature: gene Location: 98258-98647 bp Ori: EOG16259.1 Feature: domain Description: TcpE Location: 98276-98576 bp Feature: domain Description: TcpE Location: 98276-98576 bp Feature: gene Location: 98707-99210 bp Ori: EOG16260.1 Feature: domain Description: ArdA Location: 98725-99196 bp Feature: domain Description: ArdA Location: 98725-991 96 bp Feature: gene Location: 99551-101461 bp Ori: EOG16261.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 99884-100622 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 99884-1 00622 bp Feature: domain Description: HNHc Note: nucleases Location: 101177-101342 bp Feature: domain Description: HNHc Note: nucleases Location: 1 01 1 77-1 01 342 bp Feature: gene Location: 102207-102344 bp Ori: EOG16262.1 Feature: domain Description: DUF3789 Location: 102234-102327 bp Feature: domain Description: DUF3789 Location: 1 02234-1 02327 bp Feature: gene Location: 102341-103525 bp Ori: EOG16263.1 Feature: domain Description: HTH_XRE Location: 102371-102515 bp Feature: domain Description: HTH_XRE Location: 1 02371 -1 0251 5 bp Feature: domain Description: Rol_Rep_N Location: 102548-102812 bp Feature: domain Description: Rol_Rep_N Location: 1 02548-1 0281 2 bp Feature: domain Description: Rep_trans Location: 102836-103448 bp Feature: domain Description: Rep_trans Location: 1 02836-1 03448 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT TcpE (pfam12648), ArdA (pfam07275), RVT-GII, HNHc (smart00507), DUF3789 (pfam12664), HTH_XRE (smart00530), Rol_Rep_N (pfam18106), Rep_trans (pfam02486)

Seq: KB948015.1 Enterococcus faecium VRE 108 genomic scaffold acEQV-supercont1.11, whole genome shotgun sequence (3530 bp)
Overview 1 RT 1: 63-3530 bp Neighborhood of RT #1 [63, 3530] HsdM RVT-AbiP2 Feature: gene Location: 63-1541 bp Ori: EOG16627.1 Feature: domain Description: HsdM Location: 84-1509 bp Feature: domain Description: HsdM Location: 84-1509 bp Feature: gene Location: 1879-3354 bp Ori: EOG16628.1 Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 2227-2692 bp Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 2 2 2 7-2 692 bp Feature: gene Location: 3332-3530 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HsdM (COG0286), RVT-AbiP2