myRT

myRT report for GCA_000395845.1_Ente_faec_VRE_110_V1

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Seq: KB948089.1 Enterococcus faecium VRE 110 genomic scaffold acHXj-supercont1.9, whole genome shotgun sequence (137639 bp)
Overview 1 RT 1: 5076-9989 bp Neighborhood of RT #1 [5076, 9989] VirB4 RVT-GII HNHc Feature: gene Location: 5076-5228 bp Feature: gene Location: 5222-6916 bp Ori: EOG16759.1 Feature: domain Description: VirB4 Location: 5540-6224 bp Feature: domain Description: VirB4 Location: 5540-6224 bp Feature: gene Location: 7604-9481 bp Ori: EOG16760.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7919-8657 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 791 9-8657 bp Feature: domain Description: HNHc Note: nucleases Location: 9215-9368 bp Feature: domain Description: HNHc Note: nucleases Location: 921 5-9368 bp Feature: gene Location: 9509-9619 bp Feature: gene Location: 9669-9989 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT VirB4 (COG3451), RVT-GII, HNHc (smart00507)

Seq: KB948058.1 Enterococcus faecium VRE 110 genomic scaffold acHXj-supercont1.19, whole genome shotgun sequence (3409 bp)
Overview 1 RT 1: 61-2690 bp Neighborhood of RT #1 [61, 3352] HsdM RVT-AbiP2 Feature: gene Location: 61-1539 bp Ori: EOG14489.1 Feature: domain Description: HsdM Location: 82-1507 bp Feature: domain Description: HsdM Location: 82 -1507 bp Feature: gene Location: 1877-3352 bp Ori: EOG14490.1 Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 2225-2690 bp Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 2 2 2 5-2 690 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HsdM (COG0286), RVT-AbiP2

Seq: KB948085.1 Enterococcus faecium VRE 110 genomic scaffold acHXj-supercont1.5, whole genome shotgun sequence (732102 bp)
Overview 1 RT 1: 580324-585514 bp Neighborhood of RT #1 [580324, 585591] TcpE ArdA RVT-GII HNHc DUF3789 HTH_XRE Rol_Rep_N Rep_trans Feature: gene Location: 580324-580713 bp Ori: EOG22057.1 Feature: domain Description: TcpE Location: 580342-580642 bp Feature: domain Description: TcpE Location: 5803 42-580642 bp Feature: gene Location: 580773-581276 bp Ori: EOG22058.1 Feature: domain Description: ArdA Location: 580791-581262 bp Feature: domain Description: ArdA Location: 580791-581262 bp Feature: gene Location: 581617-583527 bp Ori: EOG22059.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 581950-582688 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 581950-582688 bp Feature: domain Description: HNHc Note: nucleases Location: 583243-583408 bp Feature: domain Description: HNHc Note: nucleases Location: 583 243 -583 408 bp Feature: gene Location: 584273-584410 bp Ori: EOG22060.1 Feature: domain Description: DUF3789 Location: 584300-584393 bp Feature: domain Description: DUF3 789 Location: 5843 00-5843 93 bp Feature: gene Location: 584407-585591 bp Ori: EOG22061.1 Feature: domain Description: HTH_XRE Location: 584437-584581 bp Feature: domain Description: HTH_XRE Location: 58443 7-584581 bp Feature: domain Description: Rol_Rep_N Location: 584614-584878 bp Feature: domain Description: Rol_Rep_N Location: 584614-584878 bp Feature: domain Description: Rep_trans Location: 584902-585514 bp Feature: domain Description: Rep_trans Location: 584902-585514 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT TcpE (pfam12648), ArdA (pfam07275), RVT-GII, HNHc (smart00507), DUF3789 (pfam12664), HTH_XRE (smart00530), Rol_Rep_N (pfam18106), Rep_trans (pfam02486)