myRT

myRT report for GCA_000395865.1_Ente_faec_VRE_13_V1

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Seq: KB948112.1 Enterococcus faecium VRE 13 genomic scaffold acEQo-supercont1.3, whole genome shotgun sequence (262123 bp)
Overview 1 RT 1: 133355-138913 bp Neighborhood of RT #1 [133355, 138921] Dcm FtsK RVT-GII HNHc FtsK_SpoIIIE RelB_DinJ Feature: gene Location: 133355-134497 bp Ori: EOG20630.1 Feature: domain Description: Dcm Location: 133358-134471 bp Feature: domain Description: Dcm Location: 1 33358-1 34471 bp Feature: gene Location: 134542-134922 bp Ori: EOG20631.1 Feature: domain Description: FtsK Location: 134557-134797 bp Feature: domain Description: FtsK Location: 1 34557-1 34797 bp Feature: gene Location: 135024-136898 bp Ori: EOG20632.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 135390-136086 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 35390-1 36086 bp Feature: domain Description: HNHc Note: nucleases Location: 136626-136785 bp Feature: domain Description: HNHc Note: nucleases Location: 1 36626-1 36785 bp Feature: gene Location: 137492-138508 bp Ori: EOG20633.1 Feature: domain Description: FtsK_SpoIIIE Location: 138149-138389 bp Feature: domain Description: FtsK_SpoIIIE Location: 1 381 49-1 38389 bp Feature: gene Location: 138577-138921 bp Ori: EOG20634.1 Feature: domain Description: RelB_DinJ Location: 138787-138913 bp Feature: domain Description: RelB_DinJ Location: 1 38787-1 3891 3 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Dcm (COG0270), FtsK (COG1674), RVT-GII, HNHc (smart00507), FtsK_SpoIIIE (pfam01580), RelB_DinJ (TIGR02384)

Seq: KB948099.1 Enterococcus faecium VRE 13 genomic scaffold acEQo-supercont1.18, whole genome shotgun sequence (3360 bp)
Overview 1 RT 1: 61-2690 bp Neighborhood of RT #1 [61, 3352] HsdM RVT-AbiP2 Feature: gene Location: 61-1539 bp Ori: EOG15314.1 Feature: domain Description: HsdM Location: 82-1507 bp Feature: domain Description: HsdM Location: 82 -1507 bp Feature: gene Location: 1877-3352 bp Ori: EOG15315.1 Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 2225-2690 bp Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 2 2 2 5-2 690 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HsdM (COG0286), RVT-AbiP2

Seq: KB948118.1 Enterococcus faecium VRE 13 genomic scaffold acEQo-supercont1.7, whole genome shotgun sequence (373678 bp)
Overview 1 RT 1: 27186-33796 bp Neighborhood of RT #1 [27186, 33867] Transposase_mut AAA_10 RVT-GII AAA_10 TcpE Feature: gene Location: 27186-28373 bp Ori: EOG19286.1 Feature: domain Description: Transposase_mut Location: 27189-28332 bp Feature: domain Description: Transposase_mut Location: 27189-283 3 2 bp Feature: gene Location: 28466-29284 bp Ori: EOG19287.1 Feature: domain Description: AAA_10 Location: 28469-29270 bp Feature: domain Description: AAA_10 Location: 28469-29270 bp Feature: gene Location: 29418-31244 bp Ori: EOG19288.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 29718-30417 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 29718-3 0417 bp Feature: gene Location: 31941-33491 bp Ori: EOG19289.1 Feature: domain Description: AAA_10 Location: 33270-33453 bp Feature: domain Description: AAA_10 Location: 3 3 270-3 3 453 bp Feature: gene Location: 33478-33867 bp Ori: EOG19290.1 Feature: domain Description: TcpE Location: 33496-33796 bp Feature: domain Description: TcpE Location: 3 3 496-3 3 796 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Transposase_mut (pfam00872), AAA_10 (pfam12846), RVT-GII, TcpE (pfam12648)