myRT

myRT report for GCA_000396805.1_Ente_faec_HM1073_V1

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Seq: KB949487.1 Enterococcus faecium HM1073 genomic scaffold acEPF-supercont1.5, whole genome shotgun sequence (17327 bp)
Overview 1 RT 1: 8429-14329 bp Neighborhood of RT #1 [8429, 14442] TOPRIM_TopoIA_TopoIII RVT-GII HNHc PRK07726 YdjM Feature: gene Location: 8429-8791 bp Feature: gene Location: 8861-9238 bp Feature: domain Description: TOPRIM_TopoIA_TopoIII Location: 8870-9227 bp Feature: domain Description: TOPRIM_TopoIA_TopoIII Location: 8870-9227 bp Feature: gene Location: 9975-11861 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 10290-11028 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 0290-1 1 028 bp Feature: domain Description: HNHc Note: nucleases Location: 11577-11745 bp Feature: domain Description: HNHc Note: nucleases Location: 1 1 577-1 1 745 bp Feature: gene Location: 12069-13745 bp Feature: domain Description: PRK07726 Location: 12084-13572 bp Feature: domain Description: PRK07726 Location: 1 2084-1 3572 bp Feature: gene Location: 13873-14442 bp Feature: domain Description: YdjM Location: 13885-14329 bp Feature: domain Description: YdjM Location: 1 3885-1 4329 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK07726 (DNA topoisomerase 3), YdjM (pfam04307), TOPRIM_TopoIA_TopoIII (cd03362), RVT-GII, HNHc (smart00507)

Seq: KB949478.1 Enterococcus faecium HM1073 genomic scaffold acEPF-supercont1.13, whole genome shotgun sequence (35052 bp)
Overview 1 RT 1: 32694-34566 bp Neighborhood of RT #1 [32694, 35052] HTH_Tnp_1 PHA02517 RVT-GII Feature: gene Location: 32694-32948 bp Feature: domain Description: HTH_Tnp_1 Location: 32700-32904 bp Feature: domain Description: HTH_Tnp_1 Location: 32 700-32 904 bp Feature: gene Location: 32999-33820 bp Feature: domain Description: PHA02517 Location: 33017-33797 bp Feature: domain Description: PHA02 517 Location: 33017-33797 bp Feature: gene Location: 33837-35052 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 33867-34566 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 33867-34566 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HTH_Tnp_1 (pfam01527), PHA02517 (putative transposase OrfB; Reviewed), RVT-GII