myRT

myRT report for GCA_000396925.1_Ente_faec_UAA951_V1

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Seq: KB949697.1 Enterococcus faecium UAA951 genomic scaffold acvJZ-supercont1.16, whole genome shotgun sequence (2661 bp)
Overview 1 RT 1: 1-1942 bp Neighborhood of RT #1 [1, 2604] HsdM RVT-AbiP2 Feature: gene Location: 1-791 bp Ori: EOM31466.1 Feature: domain Description: HsdM Location: 22-790 bp Feature: domain Description: HsdM Location: 22-790 bp Feature: gene Location: 1129-2604 bp Ori: EOM31467.1 Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 1477-1942 bp Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 1 477-1 942 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HsdM (COG0286), RVT-AbiP2

Seq: KB949691.1 Enterococcus faecium UAA951 genomic scaffold acvJZ-supercont1.10, whole genome shotgun sequence (619014 bp)
Overview 1 RT 1: 492813-498280 bp Neighborhood of RT #1 [492813, 498357] ArdA RVT-GII HNHc DUF3789 HTH_XRE Rol_Rep_N Rep_trans Feature: gene Location: 492813-493517 bp Feature: gene Location: 493587-494090 bp Ori: EOM35039.1 Feature: domain Description: ArdA Location: 493605-494076 bp Feature: domain Description: ArdA Location: 493605-494076 bp Feature: gene Location: 494430-496340 bp Ori: EOM35040.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 494763-495501 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 494763-495501 bp Feature: domain Description: HNHc Note: nucleases Location: 496056-496221 bp Feature: domain Description: HNHc Note: nucleases Location: 496056-4962 2 1 bp Feature: gene Location: 497078-497176 bp Ori: EOM35041.1 Feature: domain Description: DUF3789 Location: 497096-497156 bp Feature: domain Description: DUF3789 Location: 497096-497156 bp Feature: gene Location: 497173-498357 bp Ori: EOM35042.1 Feature: domain Description: HTH_XRE Location: 497203-497347 bp Feature: domain Description: HTH_XRE Location: 4972 03-497347 bp Feature: domain Description: Rol_Rep_N Location: 497380-497644 bp Feature: domain Description: Rol_Rep_N Location: 497380-497644 bp Feature: domain Description: Rep_trans Location: 497668-498280 bp Feature: domain Description: Rep_trans Location: 497668-4982 80 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT ArdA (pfam07275), RVT-GII, HNHc (smart00507), DUF3789 (pfam12664), HTH_XRE (smart00530), Rol_Rep_N (pfam18106), Rep_trans (pfam02486)

Seq: KB949694.1 Enterococcus faecium UAA951 genomic scaffold acvJZ-supercont1.13, whole genome shotgun sequence (1203342 bp)
Overview 1 RT 1: 811232-817914 bp Neighborhood of RT #1 [811232, 817991] PHP_HisPPase SMC_prok_B SMC_prok_B ArdA RVT-GII HNHc DUF3789 HTH_XRE Rol_Rep_N Rep_trans Feature: gene Location: 811232-813079 bp Ori: EOM33010.1 Feature: domain Description: PHP_HisPPase Location: 811259-811736 bp Feature: domain Description: PHP_HisPPase Location: 811259-81173 6 bp Feature: domain Description: SMC_prok_B Location: 812138-812237 bp Feature: domain Description: SMC_prok_B Location: 81213 8-81223 7 bp Feature: domain Description: SMC_prok_B Location: 812567-813002 bp Feature: domain Description: SMC_prok_B Location: 812567-813 002 bp Feature: gene Location: 813176-813676 bp Ori: EOM33011.1 Feature: domain Description: ArdA Location: 813194-813665 bp Feature: domain Description: ArdA Location: 813 194-813 665 bp Feature: gene Location: 814017-815927 bp Ori: EOM33012.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 814350-815088 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8143 50-815088 bp Feature: domain Description: HNHc Note: nucleases Location: 815643-815808 bp Feature: domain Description: HNHc Note: nucleases Location: 815643 -815808 bp Feature: gene Location: 816673-816810 bp Ori: EOM33013.1 Feature: domain Description: DUF3789 Location: 816700-816793 bp Feature: domain Description: DUF3 789 Location: 816700-816793 bp Feature: gene Location: 816807-817991 bp Ori: EOM33014.1 Feature: domain Description: HTH_XRE Location: 816837-816981 bp Feature: domain Description: HTH_XRE Location: 81683 7-816981 bp Feature: domain Description: Rol_Rep_N Location: 817014-817278 bp Feature: domain Description: Rol_Rep_N Location: 817014-817278 bp Feature: domain Description: Rep_trans Location: 817302-817914 bp Feature: domain Description: Rep_trans Location: 8173 02-817914 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PHP_HisPPase (cd07432), SMC_prok_B (TIGR02168), ArdA (pfam07275), RVT-GII, HNHc (smart00507), DUF3789 (pfam12664), HTH_XRE (smart00530), Rol_Rep_N (pfam18106), Rep_trans (pfam02486)