myRT

myRT report for GCA_000397325.1_Ec13_E2F1_TOP293-1_120714

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Seq: AOQG01000053.1 Escherichia coli TOP293-1, whole genome shotgun sequence (42994 bp)
Overview 1 RT 1: 28214-30767 bp Neighborhood of RT #1 [28214, 30767] Inovirus_Gp2 RVT-GII Feature: gene Location: 28214-28777 bp Feature: domain Description: Inovirus_Gp2 Location: 28271-28712 bp Feature: domain Description: Inovirus_Gp2 Location: 28271 -2871 2 bp Feature: gene Location: 29241-29390 bp Feature: gene Location: 29588-30265 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 29702-30254 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 29702-30254 bp Feature: gene Location: 30252-30560 bp Feature: gene Location: 30594-30767 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Inovirus_Gp2 (pfam11726), RVT-GII

Seq: AOQG01000107.1 Escherichia coli TOP293-1, whole genome shotgun sequence (15469 bp)
Overview 1 RT 1: 2071-8314 bp Neighborhood of RT #1 [2071, 8451] Phage_integrase RVT-UG5 AbiEi_3_N AbiEi_3 AbiEii Feature: gene Location: 2071-2337 bp Feature: domain Description: Phage_integrase Location: 2137-2233 bp Feature: domain Description: Phage_integrase Location: 2 137-2 2 33 bp Feature: gene Location: 2420-2890 bp Feature: gene Location: 3237-6446 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 3765-4254 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 3765-42 54 bp Feature: gene Location: 6741-7544 bp Feature: domain Description: AbiEi_3_N Location: 6774-7035 bp Feature: domain Description: AbiEi_3_N Location: 6774-7035 bp Feature: domain Description: AbiEi_3 Location: 7047-7503 bp Feature: domain Description: AbiEi_3 Location: 7047-7503 bp Feature: gene Location: 7531-8451 bp Feature: domain Description: AbiEii Location: 7573-8314 bp Feature: domain Description: AbiEii Location: 7573-8314 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Phage_integrase (pfam00589), RVT-UG5, AbiEi_3_N (pfam17194), AbiEi_3 (pfam11459), AbiEii (pfam08843)

Seq: AOQG01000180.1 Escherichia coli TOP293-1, whole genome shotgun sequence (7608 bp)
Overview 1 RT 1: 5084-6920 bp Neighborhood of RT #1 [5084, 7456] PRK10597 SLATT_5 RVT-UG17 Feature: gene Location: 5084-5332 bp Feature: domain Description: PRK10597 Location: 5087-5327 bp Feature: domain Description: PRK10597 Location: 5087-53 27 bp Feature: gene Location: 5557-6108 bp Feature: domain Description: SLATT_5 Location: 5563-6079 bp Feature: domain Description: SLATT_5 Location: 5563 -6079 bp Feature: gene Location: 6086-7456 bp Feature: RT Description: RVT-UG17 Note: UG17 RT Location: 6314-6920 bp Feature: RT Description: RVT-UG17 Note: UG17 RT Location: 63 14-6920 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK10597 (DNA damage-inducible protein I; Provisional), SLATT_5 (pfam18160), RVT-UG17