myRT

myRT report for GCA_000397725.1_Ec72_E1U1_TOP2386_MIRA_120724

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Seq: AORB01000027.1 Escherichia coli TOP2386 UPEC_SJH_355_c27, whole genome shotgun sequence (21370 bp)
Overview 1 RT 1: 14986-19801 bp Neighborhood of RT #1 [14986, 19801] HTH_XRE RVT-Retrons PRK13889 Feature: gene Location: 14986-15201 bp Feature: gene Location: 15292-15573 bp Feature: domain Description: HTH_XRE Location: 15307-15472 bp Feature: domain Description: HTH_XRE Location: 1 5307-1 5472 bp Feature: gene Location: 15566-16666 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 15707-16259 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1 5707-1 6259 bp Feature: gene Location: 16743-18434 bp Feature: domain Description: PRK13889 Location: 16935-17514 bp Feature: domain Description: PRK1 3889 Location: 1 6935-1 751 4 bp Feature: gene Location: 19175-19801 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HTH_XRE (smart00530), RVT-Retrons, PRK13889 (conjugal transfer relaxase TraA; Provisional)

Seq: AORB01000067.1 Escherichia coli TOP2386 UPEC_SJH_355_c67, whole genome shotgun sequence (27363 bp)
Overview 1 RT 1: 14008-17075 bp Neighborhood of RT #1 [14008, 17075] RVT-UG2 PinE Feature: gene Location: 14008-14169 bp Feature: gene Location: 14467-14646 bp Feature: gene Location: 14725-16062 bp Feature: RT Description: RVT-UG2 Note: UG2 RT Location: 14977-15769 bp Feature: RT Description: RVT-UG2 Note: UG2 RT Location: 14977-15769 bp Feature: gene Location: 16161-16793 bp Feature: domain Description: PinE Location: 16224-16779 bp Feature: domain Description: PinE Location: 162 2 4-16779 bp Feature: gene Location: 16932-17075 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG2, PinE (COG1961)