myRT

myRT report for GCA_000398605.1_ASM39860v1

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Seq: ASMA01000004.1 WS1 bacterium JGI 0000059-K21 J0000059K21DRAFT_contig_3_0.4_C, whole genome shotgun sequence (33519 bp)
Overview 1 RT 1: 19335-23294 bp Neighborhood of RT #1 [19335, 24019] cas_cas6 RVT-CRISPR rve Feature: gene Location: 19335-20558 bp Feature: gene Location: 20566-21369 bp Feature: domain Description: cas_cas6 Location: 20698-21355 bp Feature: domain Description: cas_cas6 Location: 20698-21 355 bp Feature: gene Location: 21607-22458 bp Feature: RT Description: RVT-CRISPR Note: CRISPR RT Location: 21835-22438 bp Feature: RT Description: RVT-CRISPR Note: CRISPR RT Location: 21 835-22438 bp Feature: gene Location: 22623-22952 bp Feature: gene Location: 22964-24019 bp Feature: domain Description: rve Location: 22991-23294 bp Feature: domain Description: rve Location: 22991 -23294 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT cas_cas6 (TIGR01877), RVT-CRISPR, rve (pfam00665)

Seq: ASMA01000013.1 WS1 bacterium JGI 0000059-K21 J0000059K21DRAFT_contig_12_0.13_C, whole genome shotgun sequence (15054 bp)
Overview 1 RT 1: 10437-15053 bp Neighborhood of RT #1 [10437, 15052] SirA_YedF_YeeD UDP_AE_SDR_e RVT-Retrons GT_WecA_like WecG Feature: gene Location: 10437-10661 bp Feature: domain Description: SirA_YedF_YeeD Location: 10452-10653 bp Feature: domain Description: SirA_YedF_YeeD Location: 10452 -10653 bp Feature: gene Location: 11013-11942 bp Feature: domain Description: UDP_AE_SDR_e Location: 11019-11919 bp Feature: domain Description: UDP_AE_SDR_e Location: 11019-11919 bp Feature: gene Location: 12183-13328 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 12501-13077 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 12 501-13077 bp Feature: gene Location: 13739-15052 bp Feature: domain Description: GT_WecA_like Location: 13874-14579 bp Feature: domain Description: GT_WecA_like Location: 13874-14579 bp Feature: domain Description: WecG Location: 14789-15053 bp Feature: domain Description: WecG Location: 14789-15053 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT SirA_YedF_YeeD (cl00436), UDP_AE_SDR_e (cd05256), RVT-Retrons, GT_WecA_like (cd06853), WecG (COG1922)