myRT

myRT report for GCA_000399005.1_Baci_cere_BAG1X1-1_G13150_V1

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Seq: KB976165.1 Bacillus cereus BAG1X1-1 genomic scaffold acfXz-supercont1.2, whole genome shotgun sequence (846738 bp)
Overview 1 RT 1: 667976-672140 bp Neighborhood of RT #1 [667976, 672154] PDDEXK_2 RVT_N RVT-GII GIIM HNHc T_den_put_tspse Feature: gene Location: 667976-668134 bp Feature: gene Location: 668762-669031 bp Feature: domain Description: PDDEXK_2 Location: 668789-669020 bp Feature: domain Description: PDDEXK_2 Location: 668789-669020 bp Feature: gene Location: 669607-671433 bp Feature: RT Description: RVT_N Location: 669655-669898 bp Feature: RT Description: RVT_N Location: 669655-669898 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 669955-670624 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 669955-670624 bp Feature: domain Description: GIIM Note: maturase Location: 670684-670918 bp Feature: domain Description: GIIM Note: maturase Location: 670684-67091 8 bp Feature: domain Description: HNHc Note: nucleases Location: 671116-671284 bp Feature: domain Description: HNHc Note: nucleases Location: 671 1 1 6-671 284 bp Feature: gene Location: 671864-672154 bp Feature: domain Description: T_den_put_tspse Location: 671879-672140 bp Feature: domain Description: T_den_put_tspse Location: 671 879-6721 40 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PDDEXK_2 (pfam12784), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNHc (smart00507), T_den_put_tspse (TIGR01784)

Seq: KB976167.1 Bacillus cereus BAG1X1-1 genomic scaffold acfXz-supercont1.4, whole genome shotgun sequence (182763 bp)
Overview 1 RT 1: 36902-41714 bp Neighborhood of RT #1 [36902, 41714] DUF2089 DDE_Tnp_1 RVT-GII group_II_RT_mat Feature: gene Location: 36902-37198 bp Feature: domain Description: DUF2089 Location: 36929-37094 bp Feature: domain Description: DUF2 089 Location: 3692 9-37094 bp Feature: gene Location: 37471-38316 bp Feature: domain Description: DDE_Tnp_1 Location: 37828-38257 bp Feature: domain Description: DDE_Tnp_1 Location: 3782 8-382 57 bp Feature: gene Location: 39034-39873 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 39319-39814 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 39319-39814 bp Feature: gene Location: 39912-40343 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 39930-40221 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 39930-402 2 1 bp Feature: gene Location: 41283-41714 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF2089 (pfam09862), DDE_Tnp_1 (pfam01609), RVT-GII, group_II_RT_mat (TIGR04416)

Seq: KB976169.1 Bacillus cereus BAG1X1-1 genomic scaffold acfXz-supercont1.6, whole genome shotgun sequence (87195 bp)
Overview 1 RT 1: 38052-43152 bp Neighborhood of RT #1 [38052, 43152] HTH_38 T_den_put_tspse RVT_N RVT-GII GIIM HNHc PDDEXK_2 Feature: gene Location: 38052-38465 bp Feature: domain Description: HTH_38 Location: 38259-38340 bp Feature: domain Description: HTH_3 8 Location: 3 8259-3 83 40 bp Feature: gene Location: 39017-39322 bp Feature: domain Description: T_den_put_tspse Location: 39035-39311 bp Feature: domain Description: T_den_put_tspse Location: 3 903 5-3 93 11 bp Feature: gene Location: 39565-41391 bp Feature: RT Description: RVT_N Location: 39613-39856 bp Feature: RT Description: RVT_N Location: 3 9613 -3 9856 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 39913-40582 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3 9913 -40582 bp Feature: domain Description: GIIM Note: maturase Location: 40642-40876 bp Feature: domain Description: GIIM Note: maturase Location: 40642-40876 bp Feature: domain Description: HNHc Note: nucleases Location: 41074-41242 bp Feature: domain Description: HNHc Note: nucleases Location: 41074-41242 bp Feature: gene Location: 41966-42238 bp Feature: domain Description: PDDEXK_2 Location: 41996-42227 bp Feature: domain Description: PDDEXK_2 Location: 41996-42227 bp Feature: gene Location: 42916-43152 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HTH_38 (pfam13936), T_den_put_tspse (TIGR01784), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNHc (smart00507), PDDEXK_2 (pfam12784)

Seq: KB976160.1 Bacillus cereus BAG1X1-1 genomic scaffold acfXz-supercont1.1, whole genome shotgun sequence (4659562 bp)
Overview 1 RT 1: 723933-729050 bp 2 RT 2: 845380-850311 bp 3 RT 3: 2991797-2995367 bp Neighborhood of RT #1 [723933, 729050] DUF4262 T_den_put_tspse RVT_N RVT-GII GIIM HNHc PDDEXK_2 Neighborhood of RT #2 [845380, 850334] PRK13668 pheT RVT-GII GIIM Amidase_3 Neighborhood of RT #3 [2991797, 2995367] MhpC RVT-GII GIIM MhpC Feature: gene Location: 723933-724691 bp Feature: domain Description: DUF4262 Location: 724320-724650 bp Feature: domain Description: DUF4 262 Location: 724 320-724 650 bp Feature: gene Location: 724732-725424 bp Feature: domain Description: T_den_put_tspse Location: 724735-725410 bp Feature: domain Description: T_den_put_tspse Location: 724 735-7254 10 bp Feature: gene Location: 725516-727342 bp Feature: RT Description: RVT_N Location: 725564-725807 bp Feature: RT Description: RVT_N Location: 725564 -725807 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 725864-726533 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 725864 -726533 bp Feature: domain Description: GIIM Note: maturase Location: 726593-726827 bp Feature: domain Description: GIIM Note: maturase Location: 726593-726827 bp Feature: domain Description: HNHc Note: nucleases Location: 727025-727193 bp Feature: domain Description: HNHc Note: nucleases Location: 727025-727193 bp Feature: gene Location: 727991-728188 bp Feature: domain Description: PDDEXK_2 Location: 728021-728186 bp Feature: domain Description: PDDEXK_2 Location: 728021-728186 bp Feature: gene Location: 728370-729050 bp Feature: gene Location: 845380-846192 bp Feature: domain Description: PRK13668 Location: 845389-846175 bp Feature: domain Description: PRK13668 Location: 84 5389-84 6175 bp Feature: gene Location: 846189-846803 bp Feature: domain Description: pheT Location: 846417-846795 bp Feature: domain Description: pheT Location: 84 64 17-84 6795 bp Feature: gene Location: 847392-848699 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 847677-848316 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 84 7677-84 8316 bp Feature: domain Description: GIIM Note: maturase Location: 848391-848616 bp Feature: domain Description: GIIM Note: maturase Location: 84 8391-84 8616 bp Feature: gene Location: 848999-849343 bp Feature: gene Location: 849384-850334 bp Feature: domain Description: Amidase_3 Location: 849714-850311 bp Feature: domain Description: Amidase_3 Location: 84 9714 -850311 bp Feature: gene Location: 2991797-2992000 bp Feature: gene Location: 2992267-2992950 bp Feature: domain Description: MhpC Location: 2992324-2992945 bp Feature: domain Description: MhpC Location: 2992324 -299294 5 bp Feature: gene Location: 2993039-2994346 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2993324-2993963 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2993324 -2993963 bp Feature: domain Description: GIIM Note: maturase Location: 2994038-2994263 bp Feature: domain Description: GIIM Note: maturase Location: 2994 038-2994 263 bp Feature: gene Location: 2994789-2995019 bp Feature: domain Description: MhpC Location: 2994819-2994945 bp Feature: domain Description: MhpC Location: 2994 819-2994 94 5 bp Feature: gene Location: 2995230-2995367 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF4262 (pfam14081), T_den_put_tspse (TIGR01784), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNHc (smart00507), PDDEXK_2 (pfam12784), PRK13668 (hypothetical protein; Provisional), pheT (PRK09616), Amidase_3 (pfam01520)
MhpC (COG0596)