myRT

myRT report for GCA_000399065.1_Baci_cere_BAG1X2-1_G13156_V1

Download annotations/find similar RTs

Seq: KB976207.1 Bacillus cereus BAG1X2-1 genomic scaffold acfXL-supercont1.1, whole genome shotgun sequence (5281977 bp)
Overview 1 RT 1: 2283149-2286719 bp 2 RT 2: 4426031-4431230 bp 3 RT 3: 4547460-4552537 bp Neighborhood of RT #1 [2283149, 2286719] MhpC RVT-GII GIIM MhpC Neighborhood of RT #2 [4426031, 4431247] Amidase_3 RVT-GII GIIM pheT PRK13668 Neighborhood of RT #3 [4547460, 4552578] PDDEXK_2 RVT_N RVT-GII GIIM HNHc T_den_put_tspse DUF4262 Feature: gene Location: 2283149-2283286 bp Feature: gene Location: 2283497-2283727 bp Feature: domain Description: MhpC Location: 2283527-2283653 bp Feature: domain Description: MhpC Location: 2283527-2283653 bp Feature: gene Location: 2284170-2285477 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2284455-2285094 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2284455-2285094 bp Feature: domain Description: GIIM Note: maturase Location: 2285169-2285394 bp Feature: domain Description: GIIM Note: maturase Location: 22851 69-2285394 bp Feature: gene Location: 2285566-2286249 bp Feature: domain Description: MhpC Location: 2285623-2286244 bp Feature: domain Description: MhpC Location: 2285623-2286244 bp Feature: gene Location: 2286516-2286719 bp Feature: gene Location: 4426031-4426981 bp Feature: domain Description: Amidase_3 Location: 4426361-4426958 bp Feature: domain Description: Amidase_3 Location: 4426361 -4426958 bp Feature: gene Location: 4427022-4427366 bp Feature: gene Location: 4427666-4428973 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4427951-4428590 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4427951 -4428590 bp Feature: domain Description: GIIM Note: maturase Location: 4428665-4428890 bp Feature: domain Description: GIIM Note: maturase Location: 4428665-4428890 bp Feature: gene Location: 4429824-4430438 bp Feature: domain Description: pheT Location: 4430052-4430430 bp Feature: domain Description: pheT Location: 4430052-4430430 bp Feature: gene Location: 4430435-4431247 bp Feature: domain Description: PRK13668 Location: 4430444-4431230 bp Feature: domain Description: PRK1 3668 Location: 4430444-4431 230 bp Feature: gene Location: 4547460-4548140 bp Feature: gene Location: 4548322-4548519 bp Feature: domain Description: PDDEXK_2 Location: 4548352-4548517 bp Feature: domain Description: PDDEXK_2 Location: 4548352-454851 7 bp Feature: gene Location: 4549169-4550995 bp Feature: RT Description: RVT_N Location: 4549217-4549460 bp Feature: RT Description: RVT_N Location: 454921 7-4549460 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4549517-4550186 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 454951 7-45501 86 bp Feature: domain Description: GIIM Note: maturase Location: 4550246-4550480 bp Feature: domain Description: GIIM Note: maturase Location: 4550246-4550480 bp Feature: domain Description: HNHc Note: nucleases Location: 4550678-4550846 bp Feature: domain Description: HNHc Note: nucleases Location: 4550678-4550846 bp Feature: gene Location: 4551087-4551779 bp Feature: domain Description: T_den_put_tspse Location: 4551090-4551765 bp Feature: domain Description: T_den_put_tspse Location: 4551 090-4551 765 bp Feature: gene Location: 4551820-4552578 bp Feature: domain Description: DUF4262 Location: 4552207-4552537 bp Feature: domain Description: DUF4262 Location: 4552207-4552537 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT MhpC (COG0596), RVT-GII, GIIM (pfam08388), Amidase_3 (pfam01520), pheT (PRK09616), PRK13668 (hypothetical protein; Provisional), PDDEXK_2 (pfam12784), RVT_N (pfam13655), HNHc (smart00507), T_den_put_tspse (TIGR01784)
DUF4262 (pfam14081)

Seq: KB976212.1 Bacillus cereus BAG1X2-1 genomic scaffold acfXL-supercont1.2, whole genome shotgun sequence (565472 bp)
Overview 1 RT 1: 486220-490397 bp Neighborhood of RT #1 [486220, 490397] T_den_put_tspse RVT_N RVT-GII GIIM HNHc PDDEXK_2 Feature: gene Location: 486220-486510 bp Feature: domain Description: T_den_put_tspse Location: 486235-486496 bp Feature: domain Description: T_den_put_tspse Location: 4862 35-486496 bp Feature: gene Location: 486941-488767 bp Feature: RT Description: RVT_N Location: 486989-487232 bp Feature: RT Description: RVT_N Location: 486989-4872 32 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 487289-487958 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4872 89-487958 bp Feature: domain Description: GIIM Note: maturase Location: 488018-488252 bp Feature: domain Description: GIIM Note: maturase Location: 488018-4882 52 bp Feature: domain Description: HNHc Note: nucleases Location: 488450-488618 bp Feature: domain Description: HNHc Note: nucleases Location: 488450-488618 bp Feature: gene Location: 489342-489611 bp Feature: domain Description: PDDEXK_2 Location: 489369-489600 bp Feature: domain Description: PDDEXK_2 Location: 489369-489600 bp Feature: gene Location: 490239-490397 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT T_den_put_tspse (TIGR01784), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNHc (smart00507), PDDEXK_2 (pfam12784)

Seq: KB976215.1 Bacillus cereus BAG1X2-1 genomic scaffold acfXL-supercont1.5, whole genome shotgun sequence (86880 bp)
Overview 1 RT 1: 38086-43186 bp Neighborhood of RT #1 [38086, 43186] HTH_38 T_den_put_tspse RVT_N RVT-GII GIIM HNHc PDDEXK_2 Feature: gene Location: 38086-38499 bp Feature: domain Description: HTH_38 Location: 38293-38374 bp Feature: domain Description: HTH_3 8 Location: 3 8293 -3 83 74 bp Feature: gene Location: 39051-39356 bp Feature: domain Description: T_den_put_tspse Location: 39069-39345 bp Feature: domain Description: T_den_put_tspse Location: 3 9069-3 93 45 bp Feature: gene Location: 39599-41425 bp Feature: RT Description: RVT_N Location: 39647-39890 bp Feature: RT Description: RVT_N Location: 3 9647-3 9890 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 39947-40616 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3 9947-40616 bp Feature: domain Description: GIIM Note: maturase Location: 40676-40910 bp Feature: domain Description: GIIM Note: maturase Location: 40676-40910 bp Feature: domain Description: HNHc Note: nucleases Location: 41108-41276 bp Feature: domain Description: HNHc Note: nucleases Location: 41108-41276 bp Feature: gene Location: 42000-42272 bp Feature: domain Description: PDDEXK_2 Location: 42030-42261 bp Feature: domain Description: PDDEXK_2 Location: 4203 0-42261 bp Feature: gene Location: 42950-43186 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HTH_38 (pfam13936), T_den_put_tspse (TIGR01784), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNHc (smart00507), PDDEXK_2 (pfam12784)

Seq: KB976214.1 Bacillus cereus BAG1X2-1 genomic scaffold acfXL-supercont1.4, whole genome shotgun sequence (177348 bp)
Overview 1 RT 1: 97747-102455 bp Neighborhood of RT #1 [97747, 102559] group_II_RT_mat RVT-GII DDE_Tnp_1 DUF2089 Feature: gene Location: 97747-98178 bp Feature: gene Location: 99118-99549 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 99136-99427 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 99136-994 27 bp Feature: gene Location: 99588-100427 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 99873-100368 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 99873-100368 bp Feature: gene Location: 101145-101990 bp Feature: domain Description: DDE_Tnp_1 Location: 101502-101931 bp Feature: domain Description: DDE_Tnp_1 Location: 101502-101931 bp Feature: gene Location: 102263-102559 bp Feature: domain Description: DUF2089 Location: 102290-102455 bp Feature: domain Description: DUF2089 Location: 102290-1024 55 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DDE_Tnp_1 (pfam01609), DUF2089 (pfam09862), group_II_RT_mat (TIGR04416), RVT-GII