myRT

myRT report for GCA_000399085.1_Baci_cere_BAG1X2-2_V1

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Seq: KB976231.1 Bacillus cereus BAG1X2-2 genomic scaffold achrl-supercont1.6, whole genome shotgun sequence (113948 bp)
Overview 1 RT 1: 59993-65093 bp Neighborhood of RT #1 [59993, 65093] HTH_38 T_den_put_tspse RVT_N RVT-GII GIIM HNHc PDDEXK_2 Feature: gene Location: 59993-60406 bp Feature: domain Description: HTH_38 Location: 60200-60281 bp Feature: domain Description: HTH_38 Location: 60200-60281 bp Feature: gene Location: 60958-61263 bp Feature: domain Description: T_den_put_tspse Location: 60976-61252 bp Feature: domain Description: T_den_put_tspse Location: 60976-61 252 bp Feature: gene Location: 61506-63332 bp Feature: RT Description: RVT_N Location: 61554-61797 bp Feature: RT Description: RVT_N Location: 61 554-61 797 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 61854-62523 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 61 854-62523 bp Feature: domain Description: GIIM Note: maturase Location: 62583-62817 bp Feature: domain Description: GIIM Note: maturase Location: 62583-6281 7 bp Feature: domain Description: HNHc Note: nucleases Location: 63015-63183 bp Feature: domain Description: HNHc Note: nucleases Location: 6301 5-631 83 bp Feature: gene Location: 63907-64179 bp Feature: domain Description: PDDEXK_2 Location: 63937-64168 bp Feature: domain Description: PDDEXK_2 Location: 63937-641 68 bp Feature: gene Location: 64857-65093 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HTH_38 (pfam13936), T_den_put_tspse (TIGR01784), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNHc (smart00507), PDDEXK_2 (pfam12784)

Seq: KB976220.1 Bacillus cereus BAG1X2-2 genomic scaffold achrl-supercont1.1, whole genome shotgun sequence (5320306 bp)
Overview 1 RT 1: 668089-673207 bp 2 RT 2: 789523-794782 bp 3 RT 3: 2977500-2981070 bp Neighborhood of RT #1 [668089, 673207] DUF4262 T_den_put_tspse RVT_N RVT-GII GIIM HNHc PDDEXK_2 Neighborhood of RT #2 [789523, 794805] PRK13668 pheT RVT-GII GIIM Amidase_3 Neighborhood of RT #3 [2977500, 2981070] MhpC RVT-GII GIIM MhpC Feature: gene Location: 668089-668847 bp Feature: domain Description: DUF4262 Location: 668476-668806 bp Feature: domain Description: DUF42 62 Location: 668476-668806 bp Feature: gene Location: 668888-669580 bp Feature: domain Description: T_den_put_tspse Location: 668891-669566 bp Feature: domain Description: T_den_put_tspse Location: 668891-669566 bp Feature: gene Location: 669672-671498 bp Feature: RT Description: RVT_N Location: 669720-669963 bp Feature: RT Description: RVT_N Location: 66972 0-669963 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 670020-670689 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 67002 0-670689 bp Feature: domain Description: GIIM Note: maturase Location: 670749-670983 bp Feature: domain Description: GIIM Note: maturase Location: 670749-670983 bp Feature: domain Description: HNHc Note: nucleases Location: 671181-671349 bp Feature: domain Description: HNHc Note: nucleases Location: 671181-671349 bp Feature: gene Location: 672148-672345 bp Feature: domain Description: PDDEXK_2 Location: 672178-672343 bp Feature: domain Description: PDDEXK_2 Location: 672 178-672 343 bp Feature: gene Location: 672527-673207 bp Feature: gene Location: 789523-790335 bp Feature: domain Description: PRK13668 Location: 789532-790318 bp Feature: domain Description: PRK13668 Location: 789532 -790318 bp Feature: gene Location: 790332-790946 bp Feature: domain Description: pheT Location: 790560-790938 bp Feature: domain Description: pheT Location: 790560-790938 bp Feature: gene Location: 791535-792842 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 791820-792459 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 79182 0-792 459 bp Feature: domain Description: GIIM Note: maturase Location: 792534-792759 bp Feature: domain Description: GIIM Note: maturase Location: 792 534-792 759 bp Feature: gene Location: 793470-793814 bp Feature: gene Location: 793855-794805 bp Feature: domain Description: Amidase_3 Location: 794185-794782 bp Feature: domain Description: Amidase_3 Location: 794185-794782 bp Feature: gene Location: 2977500-2977703 bp Feature: gene Location: 2977970-2978653 bp Feature: domain Description: MhpC Location: 2978027-2978648 bp Feature: domain Description: MhpC Location: 2 97802 7-2 978648 bp Feature: gene Location: 2978742-2980049 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2979027-2979666 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 97902 7-2 979666 bp Feature: domain Description: GIIM Note: maturase Location: 2979741-2979966 bp Feature: domain Description: GIIM Note: maturase Location: 2 979741-2 979966 bp Feature: gene Location: 2980492-2980722 bp Feature: domain Description: MhpC Location: 2980522-2980648 bp Feature: domain Description: MhpC Location: 2 98052 2 -2 980648 bp Feature: gene Location: 2980933-2981070 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF4262 (pfam14081), T_den_put_tspse (TIGR01784), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNHc (smart00507), PDDEXK_2 (pfam12784), PRK13668 (hypothetical protein; Provisional), pheT (PRK09616), Amidase_3 (pfam01520)
MhpC (COG0596)

Seq: KB976228.1 Bacillus cereus BAG1X2-2 genomic scaffold achrl-supercont1.3, whole genome shotgun sequence (261619 bp)
Overview 1 RT 1: 7446-12026 bp Neighborhood of RT #1 [7446, 12040] PDDEXK_2 RVT_N RVT-GII GIIM HNHc PDDEXK_2 T_den_put_tspse Feature: gene Location: 7446-7604 bp Feature: gene Location: 8232-8501 bp Feature: domain Description: PDDEXK_2 Location: 8259-8490 bp Feature: domain Description: PDDEXK_2 Location: 8259-8490 bp Feature: gene Location: 9076-10775 bp Feature: RT Description: RVT_N Location: 9124-9367 bp Feature: RT Description: RVT_N Location: 9124-93 67 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 9424-10093 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 9424-10093 bp Feature: domain Description: GIIM Note: maturase Location: 10153-10387 bp Feature: domain Description: GIIM Note: maturase Location: 10153 -103 87 bp Feature: domain Description: HNHc Note: nucleases Location: 10585-10753 bp Feature: domain Description: HNHc Note: nucleases Location: 10585-10753 bp Feature: gene Location: 11396-11659 bp Feature: domain Description: PDDEXK_2 Location: 11402-11654 bp Feature: domain Description: PDDEXK_2 Location: 11402-11654 bp Feature: gene Location: 11750-12040 bp Feature: domain Description: T_den_put_tspse Location: 11765-12026 bp Feature: domain Description: T_den_put_tspse Location: 11765-12026 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PDDEXK_2 (pfam12784), T_den_put_tspse (TIGR01784), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNHc (smart00507)