myRT

myRT report for GCA_000399105.1_Baci_cere_BAG1X2-3_V1

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Seq: KB976249.1 Bacillus cereus BAG1X2-3 genomic scaffold acrGT-supercont1.5, whole genome shotgun sequence (82773 bp)
Overview 1 RT 1: 79244-82551 bp Neighborhood of RT #1 [79244, 82700] PDDEXK_2 RVT_N RVT-GII GIIM HNHc Feature: gene Location: 79244-79402 bp Feature: gene Location: 80030-80299 bp Feature: domain Description: PDDEXK_2 Location: 80057-80288 bp Feature: domain Description: PDDEXK_2 Location: 80057-80288 bp Feature: gene Location: 80874-82700 bp Feature: RT Description: RVT_N Location: 80922-81165 bp Feature: RT Description: RVT_N Location: 80922-81 1 65 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 81222-81891 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 81 222-81 891 bp Feature: domain Description: GIIM Note: maturase Location: 81951-82185 bp Feature: domain Description: GIIM Note: maturase Location: 81 951 -821 85 bp Feature: domain Description: HNHc Note: nucleases Location: 82383-82551 bp Feature: domain Description: HNHc Note: nucleases Location: 82383-82551 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PDDEXK_2 (pfam12784), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNHc (smart00507)

Seq: KB976238.1 Bacillus cereus BAG1X2-3 genomic scaffold acrGT-supercont1.12, whole genome shotgun sequence (188539 bp)
Overview 1 RT 1: 92581-98256 bp Neighborhood of RT #1 [92581, 98315] group_II_RT_mat RVT-GII DDE_Tnp_1 DDE_Tnp_1 Feature: gene Location: 92581-93012 bp Feature: gene Location: 93952-94383 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 93970-94261 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 93970-942 61 bp Feature: gene Location: 94422-95261 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 94707-95202 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 94707-952 02 bp Feature: gene Location: 95979-96824 bp Feature: domain Description: DDE_Tnp_1 Location: 96336-96765 bp Feature: domain Description: DDE_Tnp_1 Location: 96336-96765 bp Feature: gene Location: 97470-98315 bp Feature: domain Description: DDE_Tnp_1 Location: 97827-98256 bp Feature: domain Description: DDE_Tnp_1 Location: 9782 7-982 56 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT group_II_RT_mat (TIGR04416), RVT-GII, DDE_Tnp_1 (pfam01609)

Seq: KB976240.1 Bacillus cereus BAG1X2-3 genomic scaffold acrGT-supercont1.14, whole genome shotgun sequence (114004 bp)
Overview 1 RT 1: 37990-43090 bp Neighborhood of RT #1 [37990, 43090] HTH_38 T_den_put_tspse RVT_N RVT-GII GIIM HNHc PDDEXK_2 Feature: gene Location: 37990-38403 bp Feature: domain Description: HTH_38 Location: 38197-38278 bp Feature: domain Description: HTH_3 8 Location: 3 8197-3 8278 bp Feature: gene Location: 38955-39260 bp Feature: domain Description: T_den_put_tspse Location: 38973-39249 bp Feature: domain Description: T_den_put_tspse Location: 3 8973 -3 9249 bp Feature: gene Location: 39503-41329 bp Feature: RT Description: RVT_N Location: 39551-39794 bp Feature: RT Description: RVT_N Location: 3 9551-3 9794 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 39851-40520 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3 9851-40520 bp Feature: domain Description: GIIM Note: maturase Location: 40580-40814 bp Feature: domain Description: GIIM Note: maturase Location: 40580-40814 bp Feature: domain Description: HNHc Note: nucleases Location: 41012-41180 bp Feature: domain Description: HNHc Note: nucleases Location: 41012-41180 bp Feature: gene Location: 41904-42176 bp Feature: domain Description: PDDEXK_2 Location: 41934-42165 bp Feature: domain Description: PDDEXK_2 Location: 4193 4-42165 bp Feature: gene Location: 42854-43090 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HTH_38 (pfam13936), T_den_put_tspse (TIGR01784), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNHc (smart00507), PDDEXK_2 (pfam12784)

Seq: KB976239.1 Bacillus cereus BAG1X2-3 genomic scaffold acrGT-supercont1.13, whole genome shotgun sequence (187295 bp)
Overview 1 RT 1: 182157-186536 bp Neighborhood of RT #1 [182157, 186685] DDE_Tnp_1 T_den_put_tspse RVT_N RVT-GII GIIM HNHc Feature: gene Location: 182157-183647 bp Feature: domain Description: DDE_Tnp_1 Location: 182574-183372 bp Feature: domain Description: DDE_Tnp_1 Location: 182574 -183372 bp Feature: gene Location: 184138-184428 bp Feature: domain Description: T_den_put_tspse Location: 184153-184414 bp Feature: domain Description: T_den_put_tspse Location: 184 153-184 4 14 bp Feature: gene Location: 184859-186685 bp Feature: RT Description: RVT_N Location: 184907-185150 bp Feature: RT Description: RVT_N Location: 184 907-185150 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 185207-185876 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 185207-185876 bp Feature: domain Description: GIIM Note: maturase Location: 185936-186170 bp Feature: domain Description: GIIM Note: maturase Location: 185936-186170 bp Feature: domain Description: HNHc Note: nucleases Location: 186368-186536 bp Feature: domain Description: HNHc Note: nucleases Location: 186368-186536 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DDE_Tnp_1 (pfam01609), T_den_put_tspse (TIGR01784), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNHc (smart00507)

Seq: KB976237.1 Bacillus cereus BAG1X2-3 genomic scaffold acrGT-supercont1.11, whole genome shotgun sequence (4611469 bp)
Overview 1 RT 1: 1670879-1674449 bp 2 RT 2: 3818321-3823258 bp 3 RT 3: 3939395-3944472 bp Neighborhood of RT #1 [1670879, 1674449] MhpC RVT-GII GIIM MhpC Neighborhood of RT #2 [3818321, 3823275] Amidase_3 RVT-GII GIIM pheT PRK13668 Neighborhood of RT #3 [3939395, 3944513] PDDEXK_2 RVT_N RVT-GII GIIM HNHc T_den_put_tspse DUF4262 Feature: gene Location: 1670879-1671016 bp Feature: gene Location: 1671227-1671457 bp Feature: domain Description: MhpC Location: 1671257-1671383 bp Feature: domain Description: MhpC Location: 167125 7-1671383 bp Feature: gene Location: 1671900-1673207 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1672185-1672824 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1672185 -1672824 bp Feature: domain Description: GIIM Note: maturase Location: 1672899-1673124 bp Feature: domain Description: GIIM Note: maturase Location: 1672899-1673124 bp Feature: gene Location: 1673296-1673979 bp Feature: domain Description: MhpC Location: 1673353-1673974 bp Feature: domain Description: MhpC Location: 167335 3-1673974 bp Feature: gene Location: 1674246-1674449 bp Feature: gene Location: 3818321-3819271 bp Feature: domain Description: Amidase_3 Location: 3818651-3819248 bp Feature: domain Description: Amidase_3 Location: 381865 1-3819248 bp Feature: gene Location: 3819312-3819656 bp Feature: gene Location: 3819956-3821263 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3820241-3820880 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3820241-3820880 bp Feature: domain Description: GIIM Note: maturase Location: 3820955-3821180 bp Feature: domain Description: GIIM Note: maturase Location: 382095 5 -3821180 bp Feature: gene Location: 3821852-3822466 bp Feature: domain Description: pheT Location: 3822080-3822458 bp Feature: domain Description: pheT Location: 3822080-382245 8 bp Feature: gene Location: 3822463-3823275 bp Feature: domain Description: PRK13668 Location: 3822472-3823258 bp Feature: domain Description: PRK13668 Location: 3822472-382325 8 bp Feature: gene Location: 3939395-3940075 bp Feature: gene Location: 3940257-3940454 bp Feature: domain Description: PDDEXK_2 Location: 3940287-3940452 bp Feature: domain Description: PDDEXK_2 Location: 3940287-394045 2 bp Feature: gene Location: 3941104-3942930 bp Feature: RT Description: RVT_N Location: 3941152-3941395 bp Feature: RT Description: RVT_N Location: 394115 2-3941395 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3941452-3942121 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 394145 2-3942121 bp Feature: domain Description: GIIM Note: maturase Location: 3942181-3942415 bp Feature: domain Description: GIIM Note: maturase Location: 3942181-3942415 bp Feature: domain Description: HNHc Note: nucleases Location: 3942613-3942781 bp Feature: domain Description: HNHc Note: nucleases Location: 3942613-3942781 bp Feature: gene Location: 3943022-3943714 bp Feature: domain Description: T_den_put_tspse Location: 3943025-3943700 bp Feature: domain Description: T_den_put_tspse Location: 3943025 -3943700 bp Feature: gene Location: 3943755-3944513 bp Feature: domain Description: DUF4262 Location: 3944142-3944472 bp Feature: domain Description: DUF4262 Location: 3944142-3944472 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT MhpC (COG0596), RVT-GII, GIIM (pfam08388), Amidase_3 (pfam01520), pheT (PRK09616), PRK13668 (hypothetical protein; Provisional), PDDEXK_2 (pfam12784), RVT_N (pfam13655), HNHc (smart00507), T_den_put_tspse (TIGR01784)
DUF4262 (pfam14081)