myRT

myRT report for GCA_000399145.1_Baci_cere_VD021_V1

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Seq: KB976282.1 Bacillus cereus VD021 genomic scaffold acqVy-supercont1.5, whole genome shotgun sequence (618634 bp)
Overview 1 RT 1: 38597-45688 bp 2 RT 2: 114164-116820 bp 3 RT 3: 200761-206673 bp Neighborhood of RT #1 [38597, 45702] M6dom_M6dom_M6dom_TIGR03296 RVT-Retrons Trypsin_2 xerS Neighborhood of RT #2 [114164, 116879] XhlA RVT-GII GIIM phage_XkdX Neighborhood of RT #3 [200761, 206673] TraG-D_C RVT-GII Intron_maturas2 HNHc TraG_VirD4 TraG_VirD4 Feature: gene Location: 38597-38920 bp Feature: gene Location: 39093-40619 bp Feature: domain Description: M6dom_M6dom_M6dom_TIGR03296 Location: 39537-40347 bp Feature: domain Description: M6dom_M6dom_M6dom_TIGR03296 Location: 39537-40347 bp Feature: gene Location: 41199-42959 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 41370-41958 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 41 370-41 958 bp Feature: domain Description: Trypsin_2 Location: 42387-42840 bp Feature: domain Description: Trypsin_2 Location: 42387-42840 bp Feature: gene Location: 43210-43413 bp Feature: gene Location: 44629-45702 bp Feature: domain Description: xerS Location: 44653-45688 bp Feature: domain Description: xerS Location: 44653-45688 bp Feature: gene Location: 114164-114322 bp Feature: gene Location: 114376-114585 bp Feature: domain Description: XhlA Location: 114418-114565 bp Feature: domain Description: XhlA Location: 1 1 441 8-1 1 4565 bp Feature: gene Location: 114802-116100 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 115108-115738 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 1 51 08-1 1 5738 bp Feature: domain Description: GIIM Note: maturase Location: 115819-116044 bp Feature: domain Description: GIIM Note: maturase Location: 1 1 581 9-1 1 6044 bp Feature: gene Location: 116122-116385 bp Feature: gene Location: 116736-116879 bp Feature: domain Description: phage_XkdX Location: 116757-116820 bp Feature: domain Description: phage_XkdX Location: 1 1 6757-1 1 6820 bp Feature: gene Location: 200761-200970 bp Feature: gene Location: 201028-201996 bp Feature: domain Description: TraG-D_C Location: 201037-201349 bp Feature: domain Description: TraG-D_C Location: 201 037-201 349 bp Feature: gene Location: 202104-203927 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 202377-203205 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 202377-203205 bp Feature: domain Description: Intron_maturas2 Location: 203283-203601 bp Feature: domain Description: Intron_maturas2 Location: 203283-203601 bp Feature: domain Description: HNHc Note: nucleases Location: 203724-203901 bp Feature: domain Description: HNHc Note: nucleases Location: 203724-203901 bp Feature: gene Location: 204468-206126 bp Feature: domain Description: TraG_VirD4 Location: 204936-205614 bp Feature: domain Description: TraG_VirD4 Location: 204936-20561 4 bp Feature: domain Description: TraG_VirD4 Location: 205668-206064 bp Feature: domain Description: TraG_VirD4 Location: 205668-206064 bp Feature: gene Location: 206164-206673 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT M6dom_M6dom_M6dom_TIGR03296, RVT-Retrons, Trypsin_2 (pfam13365), xerS (PRK05084), XhlA (pfam10779), RVT-GII, GIIM (pfam08388), phage_XkdX (TIGR01669), TraG-D_C (pfam12696), Intron_maturas2 (pfam01348)
HNHc (smart00507), TraG_VirD4