myRT

myRT report for GCA_000399265.1_Baci_cere_BAG2O-1_G13184_V1

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Seq: KB976525.1 Bacillus cereus BAG2O-1 genomic scaffold acfXE-supercont1.5, whole genome shotgun sequence (180743 bp)
Overview 1 RT 1: 41069-45777 bp Neighborhood of RT #1 [41069, 45881] group_II_RT_mat RVT-GII DDE_Tnp_1 DUF2089 Feature: gene Location: 41069-41500 bp Feature: gene Location: 42440-42871 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 42458-42749 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 42458-42749 bp Feature: gene Location: 42910-43749 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 43195-43690 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 431 95-43690 bp Feature: gene Location: 44467-45312 bp Feature: domain Description: DDE_Tnp_1 Location: 44824-45253 bp Feature: domain Description: DDE_Tnp_1 Location: 44824-45253 bp Feature: gene Location: 45585-45881 bp Feature: domain Description: DUF2089 Location: 45612-45777 bp Feature: domain Description: DUF2089 Location: 4561 2-45777 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT group_II_RT_mat (TIGR04416), RVT-GII, DDE_Tnp_1 (pfam01609), DUF2089 (pfam09862)

Seq: KB976517.1 Bacillus cereus BAG2O-1 genomic scaffold acfXE-supercont1.1, whole genome shotgun sequence (5302848 bp)
Overview 1 RT 1: 2302435-2305930 bp 2 RT 2: 4447445-4452382 bp 3 RT 3: 4566458-4571535 bp Neighborhood of RT #1 [2302435, 2305930] MhpC RVT-GII GIIM MhpC Neighborhood of RT #2 [4447445, 4452399] Amidase_3 RVT-GII GIIM pheT PRK13668 Neighborhood of RT #3 [4566458, 4571576] PDDEXK_2 RVT_N RVT-GII GIIM HNHc T_den_put_tspse DUF4262 Feature: gene Location: 2302435-2302665 bp Feature: domain Description: MhpC Location: 2302465-2302591 bp Feature: domain Description: MhpC Location: 2 302 465-2 302 591 bp Feature: gene Location: 2303108-2303232 bp Feature: gene Location: 2303381-2304688 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2303666-2304305 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 303666-2 304305 bp Feature: domain Description: GIIM Note: maturase Location: 2304380-2304605 bp Feature: domain Description: GIIM Note: maturase Location: 2 304380-2 304605 bp Feature: gene Location: 2304777-2305460 bp Feature: domain Description: MhpC Location: 2304834-2305455 bp Feature: domain Description: MhpC Location: 2 304834-2 305455 bp Feature: gene Location: 2305727-2305930 bp Feature: gene Location: 4447445-4448395 bp Feature: domain Description: Amidase_3 Location: 4447775-4448372 bp Feature: domain Description: Amidase_3 Location: 4447775-4448372 bp Feature: gene Location: 4448436-4448780 bp Feature: gene Location: 4449080-4450387 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4449365-4450004 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4449365-4450004 bp Feature: domain Description: GIIM Note: maturase Location: 4450079-4450304 bp Feature: domain Description: GIIM Note: maturase Location: 4450079-4450304 bp Feature: gene Location: 4450976-4451590 bp Feature: domain Description: pheT Location: 4451204-4451582 bp Feature: domain Description: pheT Location: 44512 04-4451582 bp Feature: gene Location: 4451587-4452399 bp Feature: domain Description: PRK13668 Location: 4451596-4452382 bp Feature: domain Description: PRK13668 Location: 4451596-4452 382 bp Feature: gene Location: 4566458-4567138 bp Feature: gene Location: 4567320-4567517 bp Feature: domain Description: PDDEXK_2 Location: 4567350-4567515 bp Feature: domain Description: PDDEXK_2 Location: 4567350-4567515 bp Feature: gene Location: 4568167-4569993 bp Feature: RT Description: RVT_N Location: 4568215-4568458 bp Feature: RT Description: RVT_N Location: 45682 15-4568458 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4568515-4569184 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4568515-4569184 bp Feature: domain Description: GIIM Note: maturase Location: 4569244-4569478 bp Feature: domain Description: GIIM Note: maturase Location: 45692 44-4569478 bp Feature: domain Description: HNHc Note: nucleases Location: 4569676-4569844 bp Feature: domain Description: HNHc Note: nucleases Location: 4569676-4569844 bp Feature: gene Location: 4570085-4570777 bp Feature: domain Description: T_den_put_tspse Location: 4570088-4570763 bp Feature: domain Description: T_den_put_tspse Location: 4570088-4570763 bp Feature: gene Location: 4570818-4571576 bp Feature: domain Description: DUF4262 Location: 4571205-4571535 bp Feature: domain Description: DUF42 62 Location: 45712 05-4571535 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT MhpC (COG0596), RVT-GII, GIIM (pfam08388), Amidase_3 (pfam01520), pheT (PRK09616), PRK13668 (hypothetical protein; Provisional), PDDEXK_2 (pfam12784), RVT_N (pfam13655), HNHc (smart00507), T_den_put_tspse (TIGR01784)
DUF4262 (pfam14081)

Seq: KB976523.1 Bacillus cereus BAG2O-1 genomic scaffold acfXE-supercont1.3, whole genome shotgun sequence (260463 bp)
Overview 1 RT 1: 248960-253136 bp Neighborhood of RT #1 [248960, 253136] T_den_put_tspse RVT_N RVT-GII GIIM HNHc PDDEXK_2 Feature: gene Location: 248960-249250 bp Feature: domain Description: T_den_put_tspse Location: 248975-249236 bp Feature: domain Description: T_den_put_tspse Location: 248975-24923 6 bp Feature: gene Location: 249681-251507 bp Feature: RT Description: RVT_N Location: 249729-249972 bp Feature: RT Description: RVT_N Location: 249729-249972 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 250029-250698 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 250029-250698 bp Feature: domain Description: GIIM Note: maturase Location: 250758-250992 bp Feature: domain Description: GIIM Note: maturase Location: 250758-250992 bp Feature: domain Description: HNHc Note: nucleases Location: 251190-251358 bp Feature: domain Description: HNHc Note: nucleases Location: 251190-2513 58 bp Feature: gene Location: 252081-252350 bp Feature: domain Description: PDDEXK_2 Location: 252108-252339 bp Feature: domain Description: PDDEXK_2 Location: 252108-2523 3 9 bp Feature: gene Location: 252978-253136 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT T_den_put_tspse (TIGR01784), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNHc (smart00507), PDDEXK_2 (pfam12784)

Seq: KB976526.1 Bacillus cereus BAG2O-1 genomic scaffold acfXE-supercont1.6, whole genome shotgun sequence (116106 bp)
Overview 1 RT 1: 40242-45342 bp Neighborhood of RT #1 [40242, 45342] HTH_38 T_den_put_tspse RVT_N RVT-GII GIIM HNHc PDDEXK_2 Feature: gene Location: 40242-40655 bp Feature: domain Description: HTH_38 Location: 40449-40530 bp Feature: domain Description: HTH_38 Location: 4 04 4 9-4 0530 bp Feature: gene Location: 41207-41512 bp Feature: domain Description: T_den_put_tspse Location: 41225-41501 bp Feature: domain Description: T_den_put_tspse Location: 4 1225-4 1501 bp Feature: gene Location: 41755-43581 bp Feature: RT Description: RVT_N Location: 41803-42046 bp Feature: RT Description: RVT_N Location: 4 1803-4 204 6 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 42103-42772 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4 2103-4 2772 bp Feature: domain Description: GIIM Note: maturase Location: 42832-43066 bp Feature: domain Description: GIIM Note: maturase Location: 4 2832-4 3066 bp Feature: domain Description: HNHc Note: nucleases Location: 43264-43432 bp Feature: domain Description: HNHc Note: nucleases Location: 4 3264 -4 34 32 bp Feature: gene Location: 44156-44428 bp Feature: domain Description: PDDEXK_2 Location: 44186-44417 bp Feature: domain Description: PDDEXK_2 Location: 4 4 186-4 4 4 17 bp Feature: gene Location: 45106-45342 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HTH_38 (pfam13936), T_den_put_tspse (TIGR01784), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNHc (smart00507), PDDEXK_2 (pfam12784)