myRT

myRT report for GCA_000399305.1_Baci_cere_HuB4-4_V1

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Seq: KB976537.1 Bacillus cereus HuB4-4 genomic scaffold acqVu-supercont1.1, whole genome shotgun sequence (5676724 bp)
Overview 1 RT 1: 1294885-1303142 bp 2 RT 2: 2700120-2705510 bp 3 RT 3: 5661534-5668596 bp Neighborhood of RT #1 [1294885, 1303144] Spore-coat_CotZ SF1_C_UvrD RVT-GII Intron_maturas2 HNHc RVT-GII Intron_maturas2 HNHc UvrD Acetyltransf_10 Neighborhood of RT #2 [2700120, 2705590] Sfp RVT-GII GIIM HNHc BHL DUF3891 Neighborhood of RT #3 [5661534, 5668631] DDE_Tnp_1 Zn_dep_PLPC RVT-GII Intron_maturas2 HNHc SR_ResInv ETX_MTX2 Feature: gene Location: 1294885-1295355 bp Feature: domain Description: Spore-coat_CotZ Location: 1294897-1295344 bp Feature: domain Description: Spore-coat_CotZ Location: 1 294897-1 295344 bp Feature: gene Location: 1295498-1296454 bp Feature: domain Description: SF1_C_UvrD Location: 1295507-1296362 bp Feature: domain Description: SF1 _C_UvrD Location: 1 295507-1 296362 bp Feature: gene Location: 1296810-1298624 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1297074-1297905 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 297074-1 297905 bp Feature: domain Description: Intron_maturas2 Location: 1298103-1298277 bp Feature: domain Description: Intron_maturas2 Location: 1 2981 03-1 298277 bp Feature: domain Description: HNHc Note: nucleases Location: 1298439-1298613 bp Feature: domain Description: HNHc Note: nucleases Location: 1 298439-1 29861 3 bp Feature: gene Location: 1299419-1301257 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1299683-1300535 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 299683-1 300535 bp Feature: domain Description: Intron_maturas2 Location: 1300640-1300967 bp Feature: domain Description: Intron_maturas2 Location: 1 300640-1 300967 bp Feature: domain Description: HNHc Note: nucleases Location: 1301075-1301228 bp Feature: domain Description: HNHc Note: nucleases Location: 1 301 075-1 301 228 bp Feature: gene Location: 1301830-1302621 bp Feature: domain Description: UvrD Location: 1301983-1302610 bp Feature: domain Description: UvrD Location: 1 301 983-1 30261 0 bp Feature: gene Location: 1302722-1303144 bp Feature: domain Description: Acetyltransf_10 Location: 1302785-1303142 bp Feature: domain Description: Acetyltransf_1 0 Location: 1 302785-1 3031 42 bp Feature: gene Location: 2700120-2700869 bp Feature: domain Description: Sfp Location: 2700204-2700696 bp Feature: domain Description: Sfp Location: 2700204-2700696 bp Feature: gene Location: 2700894-2701436 bp Feature: gene Location: 2701772-2703661 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2702069-2702807 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2702069-2702807 bp Feature: domain Description: GIIM Note: maturase Location: 2702894-2703104 bp Feature: domain Description: GIIM Note: maturase Location: 2702894-27031 04 bp Feature: domain Description: HNHc Note: nucleases Location: 2703416-2703578 bp Feature: domain Description: HNHc Note: nucleases Location: 270341 6-2703578 bp Feature: gene Location: 2704430-2704618 bp Feature: domain Description: BHL Location: 2704433-2704583 bp Feature: domain Description: BHL Location: 2704433-2704583 bp Feature: gene Location: 2704823-2705590 bp Feature: domain Description: DUF3891 Location: 2704826-2705510 bp Feature: domain Description: DUF3891 Location: 2704826-270551 0 bp Feature: gene Location: 5661534-5662967 bp Feature: domain Description: DDE_Tnp_1 Location: 5661891-5662689 bp Feature: domain Description: DDE_Tnp_1 Location: 5661 891 -5662689 bp Feature: gene Location: 5663091-5663666 bp Feature: domain Description: Zn_dep_PLPC Location: 5663097-5663655 bp Feature: domain Description: Zn_dep_PLPC Location: 5663097-5663655 bp Feature: gene Location: 5664364-5666202 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5664628-5665480 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5664628-5665480 bp Feature: domain Description: Intron_maturas2 Location: 5665585-5665912 bp Feature: domain Description: Intron_maturas2 Location: 5665585-566591 2 bp Feature: domain Description: HNHc Note: nucleases Location: 5666020-5666173 bp Feature: domain Description: HNHc Note: nucleases Location: 5666020-56661 73 bp Feature: gene Location: 5666601-5667242 bp Feature: domain Description: SR_ResInv Location: 5666616-5667030 bp Feature: domain Description: SR_ResInv Location: 566661 6-5667030 bp Feature: gene Location: 5667729-5668631 bp Feature: domain Description: ETX_MTX2 Location: 5667969-5668596 bp Feature: domain Description: ETX_MTX2 Location: 5667969-5668596 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Spore-coat_CotZ (pfam10612), SF1_C_UvrD (cd18807), RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507), UvrD (COG0210), Acetyltransf_10 (pfam13673), Sfp (COG2091), GIIM (pfam08388), BHL (smart00411)
DUF3891 (pfam13030), DDE_Tnp_1 (pfam01609), Zn_dep_PLPC (smart00770), SR_ResInv (cd03768), ETX_MTX2 (pfam03318)