myRT

myRT report for GCA_000399565.1_Baci_cere_VD184_V1

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Seq: KB976831.1 Bacillus cereus VD184 genomic scaffold acrGY-supercont1.22, whole genome shotgun sequence (63277 bp)
Overview 1 RT 1: 31464-35537 bp Neighborhood of RT #1 [31464, 35537] DDE_Tnp_1 RVT-GII GIIM Feature: gene Location: 31464-31526 bp Feature: gene Location: 31629-31985 bp Feature: domain Description: DDE_Tnp_1 Location: 31791-31971 bp Feature: domain Description: DDE_Tnp_1 Location: 31 791 -31 971 bp Feature: gene Location: 32448-33755 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 32733-33372 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 32733-33372 bp Feature: domain Description: GIIM Note: maturase Location: 33447-33672 bp Feature: domain Description: GIIM Note: maturase Location: 33447-33672 bp Feature: gene Location: 34852-35451 bp Feature: gene Location: 35412-35537 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DDE_Tnp_1 (pfam01609), RVT-GII, GIIM (pfam08388)

Seq: KB976833.1 Bacillus cereus VD184 genomic scaffold acrGY-supercont1.24, whole genome shotgun sequence (28383 bp)
Overview 1 RT 1: 6304-13420 bp Neighborhood of RT #1 [6304, 13485] 2A0309 spore_ger_x_C RVT-GII RVT-GII Rve HTH_36 DnaA_N Feature: gene Location: 6304-7404 bp Feature: domain Description: 2A0309 Location: 6328-7378 bp Feature: domain Description: 2 A0309 Location: 632 8-7378 bp Feature: gene Location: 7401-8516 bp Feature: domain Description: spore_ger_x_C Location: 7431-8511 bp Feature: domain Description: spore_ger_x_C Location: 7431-8511 bp Feature: gene Location: 9374-10633 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 9677-10379 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 9677-10379 bp Feature: gene Location: 10725-11675 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 10734-11154 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 10734-11154 bp Feature: gene Location: 11714-12400 bp Feature: domain Description: Rve Location: 11723-12362 bp Feature: domain Description: Rve Location: 1172 3-12 362 bp Feature: gene Location: 12463-13485 bp Feature: domain Description: HTH_36 Location: 12757-12907 bp Feature: domain Description: HTH_36 Location: 12 757-12 907 bp Feature: domain Description: DnaA_N Location: 13252-13420 bp Feature: domain Description: DnaA_N Location: 132 52 -1342 0 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, Rve (COG3316), 2A0309 (TIGR00912), spore_ger_x_C (TIGR02887), HTH_36 (pfam13730), DnaA_N (pfam11638)

Seq: KB976825.1 Bacillus cereus VD184 genomic scaffold acrGY-supercont1.17, whole genome shotgun sequence (877798 bp)
Overview 1 RT 1: 134298-138226 bp Neighborhood of RT #1 [134298, 138226] PRTases_typeI COG1497 RVT-Retrons DUF4870 Feature: gene Location: 134298-135314 bp Feature: domain Description: PRTases_typeI Location: 134541-134883 bp Feature: domain Description: PRTases_typeI Location: 13 4541-13 4883 bp Feature: gene Location: 135307-135654 bp Feature: domain Description: COG1497 Location: 135310-135535 bp Feature: domain Description: COG1497 Location: 13 53 10-13 553 5 bp Feature: gene Location: 135803-136867 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 136073-136625 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 13 6073 -13 6625 bp Feature: gene Location: 137633-137971 bp Feature: domain Description: DUF4870 Location: 137672-137936 bp Feature: domain Description: DUF4870 Location: 13 7672-13 793 6 bp Feature: gene Location: 137975-138226 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRTases_typeI (cl00309), COG1497 (Predicted transcriptional regulator ), RVT-Retrons, DUF4870 (pfam09685)

Seq: KB976836.1 Bacillus cereus VD184 genomic scaffold acrGY-supercont1.27, whole genome shotgun sequence (36586 bp)
Overview 1 RT 1: 17637-21711 bp Neighborhood of RT #1 [17637, 21711] YueH DNase_NucA_NucB RVT-GII Intron_maturas2 DNase_NucA_NucB Feature: gene Location: 17637-17888 bp Feature: domain Description: YueH Location: 17685-17853 bp Feature: domain Description: YueH Location: 17685-17853 bp Feature: gene Location: 17911-18228 bp Feature: domain Description: DNase_NucA_NucB Location: 18055-18214 bp Feature: domain Description: DNase_NucA_NucB Location: 18055-18214 bp Feature: gene Location: 18813-20438 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 19077-19908 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 19077-19908 bp Feature: domain Description: Intron_maturas2 Location: 19989-20274 bp Feature: domain Description: Intron_maturas2 Location: 19989-20274 bp Feature: gene Location: 20696-20860 bp Feature: domain Description: DNase_NucA_NucB Location: 20729-20855 bp Feature: domain Description: DNase_NucA_NucB Location: 20729-20855 bp Feature: gene Location: 21001-21711 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT YueH (pfam14166), DNase_NucA_NucB (pfam14040), RVT-GII, Intron_maturas2 (pfam01348)

Seq: KB976835.1 Bacillus cereus VD184 genomic scaffold acrGY-supercont1.26, whole genome shotgun sequence (1385015 bp)
Overview 1 RT 1: 446386-452721 bp Neighborhood of RT #1 [446386, 452777] YugN amiF RVT-GII HNHc RVT-GII amiF caa3_CtaG Feature: gene Location: 446386-446751 bp Feature: domain Description: YugN Location: 446404-446665 bp Feature: domain Description: YugN Location: 446404-446665 bp Feature: gene Location: 446798-447421 bp Feature: domain Description: amiF Location: 446801-447416 bp Feature: domain Description: amiF Location: 446801-447416 bp Feature: gene Location: 447538-449370 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 447838-448543 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 447838-4485 43 bp Feature: domain Description: HNHc Note: nucleases Location: 449122-449254 bp Feature: domain Description: HNHc Note: nucleases Location: 449122-44925 4 bp Feature: gene Location: 449575-450540 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 449875-450487 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 449875 -45 0487 bp Feature: gene Location: 451256-451645 bp Feature: domain Description: amiF Location: 451259-451631 bp Feature: domain Description: amiF Location: 45 125 9-45 1631 bp Feature: gene Location: 451872-452777 bp Feature: domain Description: caa3_CtaG Location: 451881-452721 bp Feature: domain Description: caa3_CtaG Location: 45 1881-45 2721 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT YugN (pfam08868), amiF (PRK13287), RVT-GII, HNHc (smart00507), caa3_CtaG (TIGR02737)