myRT

myRT report for GCA_000402175.1_ASM40217v1

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Seq: AQSV01000035.1 Cloacimonetes bacterium JGI 0000014-H19 WWE1_4DRAFT_contig_70.71_C, whole genome shotgun sequence (3176 bp)
Overview 1 RT 1: 701-3054 bp Neighborhood of RT #1 [701, 3092] CRISPR_Cas2 cas_cas6 RVT-CRISPR Cas1_I-II-III Feature: gene Location: 701-997 bp Feature: domain Description: CRISPR_Cas2 Location: 740-953 bp Feature: domain Description: CRISPR_Cas2 Location: 740-953 bp Feature: gene Location: 966-3092 bp Feature: domain Description: cas_cas6 Location: 1071-1215 bp Feature: domain Description: cas_cas6 Location: 1 071 -1 21 5 bp Feature: RT Description: RVT-CRISPR Note: CRISPR RT Location: 1452-1986 bp Feature: RT Description: RVT-CRISPR Note: CRISPR RT Location: 1 452-1 986 bp Feature: domain Description: Cas1_I-II-III Location: 2136-3054 bp Feature: domain Description: Cas1 _I-II-III Location: 21 36-3054 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT CRISPR_Cas2 (pfam09827), cas_cas6 (TIGR01877), RVT-CRISPR, Cas1_I-II-III (cl00656)

Seq: AQSV01000099.1 Cloacimonetes bacterium JGI 0000014-H19 WWE1_4DRAFT_contig_6.7_C, whole genome shotgun sequence (23929 bp)
Overview 1 RT 1: 656-11964 bp Neighborhood of RT #1 [656, 12002] RVT-GII GIIM YyaL alaS Feature: gene Location: 656-2080 bp Feature: gene Location: 2296-2664 bp Feature: gene Location: 4195-5559 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4531-5191 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4531-5191 bp Feature: domain Description: GIIM Note: maturase Location: 5269-5479 bp Feature: domain Description: GIIM Note: maturase Location: 52 69-5479 bp Feature: gene Location: 6314-8107 bp Feature: domain Description: YyaL Location: 6326-7868 bp Feature: domain Description: YyaL Location: 632 6-7868 bp Feature: gene Location: 9369-12002 bp Feature: domain Description: alaS Location: 9375-11964 bp Feature: domain Description: alaS Location: 9375-11964 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), YyaL (COG1331), alaS (TIGR00344)