myRT

myRT report for GCA_000402515.1_ASM40251v1

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Seq: AQRL01000028.1 Nanoarchaeota archaeon SCGC AAA011-G17 A11G17DRAFT_contig_10_0.11_C, whole genome shotgun sequence (38023 bp)
Overview 1 RT 1: 180-5059 bp 2 RT 2: 20281-25866 bp Neighborhood of RT #1 [180, 5059] HicB RVT-DGRs pheS Neighborhood of RT #2 [20281, 25866] RVT-DGRs Feature: gene Location: 180-902 bp Feature: gene Location: 1098-1367 bp Feature: domain Description: HicB Location: 1125-1293 bp Feature: domain Description: HicB Location: 1 1 25-1 293 bp Feature: gene Location: 1776-2843 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 1983-2631 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 1 983-2631 bp Feature: gene Location: 2937-4433 bp Feature: domain Description: pheS Location: 2958-4416 bp Feature: domain Description: pheS Location: 2958-441 6 bp Feature: gene Location: 4472-5059 bp Feature: gene Location: 20281-21261 bp Feature: gene Location: 21258-22805 bp Feature: gene Location: 23009-24223 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 23342-23945 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 23342-23945 bp Feature: gene Location: 24545-24901 bp Feature: gene Location: 25114-25866 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HicB (pfam05534), RVT-DGRs, pheS (TIGR00468)

Seq: AQRL01000033.1 Nanoarchaeota archaeon SCGC AAA011-G17 A11G17DRAFT_contig_5_0.6_C, whole genome shotgun sequence (48865 bp)
Overview 1 RT 1: 24988-29918 bp 2 RT 2: 45555-48677 bp Neighborhood of RT #1 [24988, 29926] Cas4_I-A_I-B_I-C_I-D_II-B Cas4_I-A_I-B_I-C_I-D_II-B AE_Prim_S_like AE_Prim_S_like RVT-DGRs PRK03947 Neighborhood of RT #2 [45555, 48677] DUF378 rpoP rpoP rpoP RVT-DGRs Feature: gene Location: 24988-25782 bp Feature: domain Description: Cas4_I-A_I-B_I-C_I-D_II-B Location: 24994-25129 bp Feature: domain Description: Cas4_I-A_I-B_I-C_I-D_II-B Location: 2 4994-2 512 9 bp Feature: domain Description: Cas4_I-A_I-B_I-C_I-D_II-B Location: 25396-25774 bp Feature: domain Description: Cas4_I-A_I-B_I-C_I-D_II-B Location: 2 5396-2 5774 bp Feature: gene Location: 25846-27306 bp Feature: domain Description: AE_Prim_S_like Location: 26104-26368 bp Feature: domain Description: AE_Prim_S_like Location: 2 6104-2 6368 bp Feature: domain Description: AE_Prim_S_like Location: 26704-26767 bp Feature: domain Description: AE_Prim_S_like Location: 2 6704-2 6767 bp Feature: gene Location: 27389-28414 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 27599-28214 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 2 7599-2 82 14 bp Feature: gene Location: 28725-29453 bp Feature: gene Location: 29513-29926 bp Feature: domain Description: PRK03947 Location: 29519-29918 bp Feature: domain Description: PRK03947 Location: 2 9519-2 9918 bp Feature: gene Location: 45555-45752 bp Feature: domain Description: DUF378 Location: 45573-45738 bp Feature: domain Description: DUF378 Location: 45573-45738 bp Feature: gene Location: 45762-46178 bp Feature: domain Description: rpoP Location: 45855-45900 bp Feature: domain Description: rpoP Location: 45855-45900 bp Feature: domain Description: rpoP Location: 45936-46035 bp Feature: domain Description: rpoP Location: 45936-46035 bp Feature: domain Description: rpoP Location: 46125-46173 bp Feature: domain Description: rpoP Location: 4612 5-46173 bp Feature: gene Location: 46221-47324 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 46458-47070 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 46458-47070 bp Feature: gene Location: 47607-48374 bp Feature: gene Location: 48453-48677 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Cas4_I-A_I-B_I-C_I-D_II-B (cl00641), AE_Prim_S_like (cl01287), RVT-DGRs, PRK03947 (prefoldin subunit alpha; Reviewed), DUF378 (pfam04070), rpoP (PRK00398)