myRT

myRT report for GCA_000403135.1_ArSv1

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Seq: AQPN01000112.1 Arcticibacter svalbardensis MN12-7 contig00071, whole genome shotgun sequence (20185 bp)
Overview 1 RT 1: 13290-19545 bp Neighborhood of RT #1 [13290, 19580] SusD RVT-UG7 DUF2075 Feature: gene Location: 13290-15044 bp Ori: EOR93492.1 Feature: domain Description: SusD Location: 13377-14841 bp Feature: domain Description: SusD Location: 1 3377-1 4841 bp Feature: gene Location: 15406-15537 bp Feature: gene Location: 15575-17185 bp Ori: EOR93494.1 Feature: RT Description: RVT-UG7 Note: UG7 RT Location: 16043-16436 bp Feature: RT Description: RVT-UG7 Note: UG7 RT Location: 1 6043-1 6436 bp Feature: gene Location: 17545-17670 bp Feature: gene Location: 17730-19580 bp Ori: EOR93496.1 Feature: domain Description: DUF2075 Location: 18513-19545 bp Feature: domain Description: DUF2075 Location: 1 851 3-1 9545 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT SusD (NF033071), RVT-UG7, DUF2075 (pfam09848)

Seq: AQPN01000101.1 Arcticibacter svalbardensis MN12-7 contig00021, whole genome shotgun sequence (74722 bp)
Overview 1 RT 1: 28667-33099 bp Neighborhood of RT #1 [28667, 33099] SusD-like_3 SusD_RagB RVT-GII KOG2566 Feature: gene Location: 28667-30592 bp Ori: EOR93912.1 Feature: domain Description: SusD-like_3 Location: 28748-29330 bp Feature: domain Description: SusD-like_3 Location: 2 8748-2 9330 bp Feature: domain Description: SusD_RagB Location: 29684-30590 bp Feature: domain Description: SusD_RagB Location: 2 9684-30590 bp Feature: gene Location: 30706-30825 bp Feature: gene Location: 30858-31010 bp Ori: EOR93914.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 30861-30996 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 30861-30996 bp Feature: gene Location: 31296-32768 bp Ori: EOR93915.1 Feature: domain Description: KOG2566 Location: 31473-32760 bp Feature: domain Description: KOG2 566 Location: 31473-32 760 bp Feature: gene Location: 32938-33099 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT SusD-like_3 (pfam14322), SusD_RagB (pfam07980), RVT-GII, KOG2566 (KOG2566, Beta-glucocerebrosidase )

Seq: AQPN01000076.1 Arcticibacter svalbardensis MN12-7 contig00041, whole genome shotgun sequence (42120 bp)
Overview 1 RT 1: 1927-6587 bp Neighborhood of RT #1 [1927, 6880] PRK15098 PRK15098 GH43_Bt3655-like RVT-GII LacZ PRK14098 Feature: gene Location: 1927-4053 bp Ori: EOR94842.1 Feature: domain Description: PRK15098 Location: 1957-2041 bp Feature: domain Description: PRK15098 Location: 1957-2041 bp Feature: domain Description: PRK15098 Location: 2179-4036 bp Feature: domain Description: PRK15098 Location: 2179-403 6 bp Feature: gene Location: 4240-5115 bp Ori: EOR94843.1 Feature: domain Description: GH43_Bt3655-like Location: 4387-5113 bp Feature: domain Description: GH43 _Bt3 655-like Location: 43 87-5113 bp Feature: gene Location: 5520-5960 bp Ori: EOR94844.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5535-5685 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 553 5-5685 bp Feature: domain Description: LacZ Location: 5685-5907 bp Feature: domain Description: LacZ Location: 5685-5907 bp Feature: gene Location: 5927-6085 bp Feature: gene Location: 6092-6880 bp Ori: EOR94846.1 Feature: domain Description: PRK14098 Location: 6095-6587 bp Feature: domain Description: PRK14098 Location: 6095-6587 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK15098 (beta-glucosidase BglX), GH43_Bt3655-like (cd08983), RVT-GII, LacZ (COG3250), PRK14098 (starch synthase)