myRT

myRT report for GCA_000403315.2_Lach_bact_A2_V1

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Seq: KE159638.1 Lachnospiraceae bacterium A2 genomic scaffold acPFL-supercont1.2, whole genome shotgun sequence (706046 bp) Associated domains: Maff2 (pfam12750), TraG-D_C (pfam12696), RVT-GII, HNHc (smart00507), VirD4 (COG3505), DUF3801 (pfam12687)

Seq: KE159640.1 Lachnospiraceae bacterium A2 genomic scaffold acPFL-supercont1.4, whole genome shotgun sequence (373060 bp) Associated domains: TnpV (pfam14198), RVT-GII, Intron_maturas2 (pfam01348), TraG-D_C (pfam12696), HNHc (smart00507), T4SS-DNA_transf (pfam02534), TnpW (pfam14202), DUF3848 (pfam12959), C_GCAxxG_C_C (TIGR01909), RVT-Retrons
COG3666 (Transposase ), DDE_Tnp_1_6 (pfam13751)

Seq: KE159636.1 Lachnospiraceae bacterium A2 genomic scaffold acPFL-supercont1.1, whole genome shotgun sequence (3213603 bp) Associated domains: TraC-F-type (TIGR02746), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), VirB4_CagE (TIGR00929), PrgI (pfam12666), OmpR (COG0745), HTH_24 (pfam13412), NagC (COG1940), RVT-Retrons
PHA00653 (mtd;major tropism determinant), Avd_like (cd16376), RVT-DGRs, Phage_holin_4_1 (pfam05105), TnpW (pfam14202), VirD4 (COG3505), Intron_maturas2 (pfam01348), TnpV (pfam14198), HTH_XRE (smart00530), HNHc (smart00507)
DUF3848 (pfam12959), Maff2 (pfam12750), DUF3801 (pfam12687), CxxCxxCC (pfam03692), Acetyltransf_1 (pfam00583), KOG3010 (KOG3010, Methyltransferase ), SR_TndX_transposase (cd03770), Recombinase (pfam07508), Zn_ribbon_recom (pfam13408), DUF4368 (pfam14287)
CENP-F_leu_zip (pfam10473), COG3666 (Transposase ), DDE_Tnp_1_6 (pfam13751)