myRT

myRT report for GCA_000403455.2_Dore_bact_5-2_V1

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Seq: KE159718.1 Dorea sp. 5-2 genomic scaffold acPFE-supercont1.12, whole genome shotgun sequence (260478 bp)
Overview 1 RT 1: 12059-24320 bp Neighborhood of RT #1 [12059, 24418] TTRAP YtxK COG4646 KOG1000 RVT_N RVT-GII GIIM DUF3848 DUF3849 Feature: gene Location: 12059-12274 bp Feature: domain Description: TTRAP Location: 12071-12260 bp Feature: domain Description: TTRAP Location: 1 2071 -1 2260 bp Feature: gene Location: 12351-20390 bp Feature: domain Description: YtxK Location: 16425-17181 bp Feature: domain Description: YtxK Location: 1 6425-1 71 81 bp Feature: domain Description: COG4646 Location: 17232-19815 bp Feature: domain Description: COG4646 Location: 1 7232-1 981 5 bp Feature: domain Description: KOG1000 Location: 20247-20373 bp Feature: domain Description: KOG1 000 Location: 20247-20373 bp Feature: gene Location: 20974-22644 bp Feature: RT Description: RVT_N Location: 21019-21262 bp Feature: RT Description: RVT_N Location: 21 01 9-21 262 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 21307-21952 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 21 307-21 952 bp Feature: domain Description: GIIM Note: maturase Location: 22009-22240 bp Feature: domain Description: GIIM Note: maturase Location: 22009-22240 bp Feature: gene Location: 22645-23610 bp Feature: gene Location: 23612-24418 bp Feature: domain Description: DUF3848 Location: 23633-23909 bp Feature: domain Description: DUF3848 Location: 23633-23909 bp Feature: domain Description: DUF3849 Location: 23945-24320 bp Feature: domain Description: DUF3849 Location: 23945-24320 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT TTRAP (pfam14203), YtxK (COG0827), COG4646 (Adenine-specific DNA methylase, N12 class ), KOG1000 (KOG1000, Chromatin remodeling protein HARP/SMARCAL1, DEAD-box superfamily ), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), DUF3848 (pfam12959), DUF3849 (pfam12960)

Seq: KE159730.1 Dorea sp. 5-2 genomic scaffold acPFE-supercont1.23, whole genome shotgun sequence (32355 bp)
Overview 1 RT 1: 23714-29972 bp Neighborhood of RT #1 [23714, 29972] PRK02224 RVT_N RVT-GII GIIM SR_TndX_transposase Recombinase Zn_ribbon_recom DUF4368 Feature: gene Location: 23714-24187 bp Feature: domain Description: PRK02224 Location: 23750-24128 bp Feature: domain Description: PRK02 2 2 4 Location: 2 3750-2 412 8 bp Feature: gene Location: 24238-25419 bp Feature: gene Location: 25420-27090 bp Feature: RT Description: RVT_N Location: 25465-25708 bp Feature: RT Description: RVT_N Location: 2 5465-2 5708 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 25753-26398 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 5753-2 6398 bp Feature: domain Description: GIIM Note: maturase Location: 26455-26686 bp Feature: domain Description: GIIM Note: maturase Location: 2 6455-2 6686 bp Feature: gene Location: 27798-29654 bp Feature: domain Description: SR_TndX_transposase Location: 27840-28254 bp Feature: domain Description: SR_TndX_transposase Location: 2 7840-2 82 54 bp Feature: domain Description: Recombinase Location: 28359-28734 bp Feature: domain Description: Recombinase Location: 2 8359-2 8734 bp Feature: domain Description: Zn_ribbon_recom Location: 28773-28965 bp Feature: domain Description: Zn_ribbon_recom Location: 2 8773-2 8965 bp Feature: domain Description: DUF4368 Location: 29241-29439 bp Feature: domain Description: DUF4368 Location: 2 92 41-2 9439 bp Feature: gene Location: 29709-29972 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK02224 (DNA double-strand break repair Rad50 ATPase), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), SR_TndX_transposase (cd03770), Recombinase (pfam07508), Zn_ribbon_recom (pfam13408), DUF4368 (pfam14287)

Seq: KE159717.1 Dorea sp. 5-2 genomic scaffold acPFE-supercont1.11, whole genome shotgun sequence (261729 bp)
Overview 1 RT 1: 128329-132716 bp Neighborhood of RT #1 [128329, 132820] DUF3795 Putative_PNPOx RVT-GII GIIM Glyoxalase_2 Feature: gene Location: 128329-128880 bp Feature: domain Description: DUF3795 Location: 128362-128533 bp Feature: domain Description: DUF3 795 Location: 1283 62-12853 3 bp Feature: gene Location: 128964-129380 bp Feature: domain Description: Putative_PNPOx Location: 129024-129198 bp Feature: domain Description: Putative_PNPOx Location: 129024-129198 bp Feature: gene Location: 129967-131265 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 130222-130912 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 13 0222-13 0912 bp Feature: domain Description: GIIM Note: maturase Location: 130999-131197 bp Feature: domain Description: GIIM Note: maturase Location: 13 0999-13 1197 bp Feature: gene Location: 131789-132274 bp Feature: gene Location: 132368-132820 bp Feature: domain Description: Glyoxalase_2 Location: 132380-132716 bp Feature: domain Description: Glyoxalase_2 Location: 13 23 80-13 2716 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF3795 (pfam12675), Putative_PNPOx (pfam01243), RVT-GII, GIIM (pfam08388), Glyoxalase_2 (pfam12681)