myRT

myRT report for GCA_000404325.1_ASM40432v1

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Seq: ASOF01000012.1 Aminicenantes bacterium SCGC AAA252-B17 A252B17DRAFT_contig_11_0.12_C, whole genome shotgun sequence (33904 bp)
Overview 1 RT 1: 1849-6369 bp Neighborhood of RT #1 [1849, 6374] HTH_32 RVT-GII AzgA PRK02304 Feature: gene Location: 1849-2493 bp Feature: domain Description: HTH_32 Location: 2038-2248 bp Feature: domain Description: HTH_32 Location: 2038-2248 bp Feature: gene Location: 2696-2905 bp Feature: gene Location: 3012-4394 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3360-4041 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3360-4041 bp Feature: gene Location: 4504-5829 bp Feature: domain Description: AzgA Location: 4510-5824 bp Feature: domain Description: AzgA Location: 451 0-5824 bp Feature: gene Location: 5838-6374 bp Feature: domain Description: PRK02304 Location: 5850-6369 bp Feature: domain Description: PRK02304 Location: 5850-6369 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HTH_32 (pfam13565), RVT-GII, AzgA (COG2252), PRK02304 (adenine phosphoribosyltransferase; Provisional)

Seq: ASOF01000026.1 Aminicenantes bacterium SCGC AAA252-B17 A252B17DRAFT_contig_24_0.26_C, whole genome shotgun sequence (15278 bp)
Overview 1 RT 1: 5967-12840 bp Neighborhood of RT #1 [5967, 12840] SIR2_2 RVT-Retrons PRK04247 Feature: gene Location: 5967-7172 bp Feature: gene Location: 7581-8591 bp Feature: domain Description: SIR2_2 Location: 7929-8490 bp Feature: domain Description: SIR2 _2 Location: 792 9-8490 bp Feature: gene Location: 9753-10568 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 9873-10425 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 9873-1042 5 bp Feature: gene Location: 10825-11799 bp Feature: domain Description: PRK04247 Location: 10852-11170 bp Feature: domain Description: PRK042 47 Location: 10852 -11170 bp Feature: gene Location: 11833-12840 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK04247 (endonuclease NucS), SIR2_2 (pfam13289), RVT-Retrons