myRT

myRT report for GCA_000405125.1_ASM40512v1

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Seq: ASNU01000032.1 Hydrogenedentes bacterium JGI 0000077-D07 J0000077D07DRAFT_contig_31_0.32_C, whole genome shotgun sequence (7393 bp)
Overview 1 RT 1: 101-5896 bp Neighborhood of RT #1 [101, 5925] DDE_3 HTH_32 RVT-GII Smc PRK11198 NagC Feature: gene Location: 101-724 bp Feature: domain Description: DDE_3 Location: 155-596 bp Feature: domain Description: DDE_3 Location: 1 55-596 bp Feature: gene Location: 760-1305 bp Feature: domain Description: HTH_32 Location: 1027-1264 bp Feature: domain Description: HTH_32 Location: 1 027-1 264 bp Feature: gene Location: 1363-2685 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1633-2293 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 633-2293 bp Feature: gene Location: 3312-4739 bp Feature: domain Description: Smc Location: 3390-3957 bp Feature: domain Description: Smc Location: 3390-3957 bp Feature: domain Description: PRK11198 Location: 4389-4734 bp Feature: domain Description: PRK1 1 1 98 Location: 4389-4734 bp Feature: gene Location: 4921-5925 bp Feature: domain Description: NagC Location: 4948-5896 bp Feature: domain Description: NagC Location: 4948-5896 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DDE_3 (pfam13358), RVT-GII, Smc (COG1196), PRK11198 (LysM domain/BON superfamily protein; Provisional), NagC (COG1940)