myRT

myRT report for GCA_000405305.1_ASM40530v1

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Seq: ASOS01000003.1 Aminicenantes bacterium SCGC AAA252-D06 A252D6DRAFT_contig_2_0.3_C, whole genome shotgun sequence (87646 bp)
Overview 1 RT 1: 10493-15142 bp Neighborhood of RT #1 [10493, 15150] DUF4372 DDE_Tnp_1 RVT-GII RVT-GII COG4584 COG4584 PRK09183 Feature: gene Location: 10493-11167 bp Feature: domain Description: DUF4372 Location: 10502-10721 bp Feature: domain Description: DUF4372 Location: 1 0502-1 0721 bp Feature: domain Description: DDE_Tnp_1 Location: 10862-11165 bp Feature: domain Description: DDE_Tnp_1 Location: 1 0862-1 1 1 65 bp Feature: gene Location: 11591-11767 bp Feature: gene Location: 11889-12392 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 12174-12390 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 21 74-1 2390 bp Feature: gene Location: 12474-12716 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 12504-12666 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 2504-1 2666 bp Feature: gene Location: 12861-14420 bp Feature: domain Description: COG4584 Location: 12891-13134 bp Feature: domain Description: COG4584 Location: 1 2891 -1 31 34 bp Feature: domain Description: COG4584 Location: 13230-13731 bp Feature: domain Description: COG4584 Location: 1 3230-1 3731 bp Feature: gene Location: 14407-15150 bp Feature: domain Description: PRK09183 Location: 14428-15142 bp Feature: domain Description: PRK091 83 Location: 1 4428-1 51 42 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF4372 (pfam14294), DDE_Tnp_1 (pfam01609), RVT-GII, COG4584 (Transposase ), PRK09183 (transposase/IS protein; Provisional)

Seq: ASOS01000022.1 Aminicenantes bacterium SCGC AAA252-D06 A252D6DRAFT_contig_21_0.22_C, whole genome shotgun sequence (39745 bp)
Overview 1 RT 1: 1630-6150 bp Neighborhood of RT #1 [1630, 6155] HTH_32 RVT-GII AzgA PRK02304 Feature: gene Location: 1630-2274 bp Feature: domain Description: HTH_32 Location: 1819-2029 bp Feature: domain Description: HTH_32 Location: 1819-2 02 9 bp Feature: gene Location: 2477-2686 bp Feature: gene Location: 2793-4175 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3141-3822 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3141-382 2 bp Feature: gene Location: 4285-5610 bp Feature: domain Description: AzgA Location: 4291-5605 bp Feature: domain Description: AzgA Location: 42 91-5605 bp Feature: gene Location: 5619-6155 bp Feature: domain Description: PRK02304 Location: 5631-6150 bp Feature: domain Description: PRK02 304 Location: 5631-6150 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HTH_32 (pfam13565), RVT-GII, AzgA (COG2252), PRK02304 (adenine phosphoribosyltransferase; Provisional)

Seq: ASOS01000026.1 Aminicenantes bacterium SCGC AAA252-D06 A252D6DRAFT_contig_25_0.26_C, whole genome shotgun sequence (32298 bp)
Overview 1 RT 1: 23909-30782 bp Neighborhood of RT #1 [23909, 30782] SIR2_2 RVT-Retrons PRK04247 Feature: gene Location: 23909-25114 bp Feature: gene Location: 25523-26533 bp Feature: domain Description: SIR2_2 Location: 25871-26432 bp Feature: domain Description: SIR2_2 Location: 25871-2643 2 bp Feature: gene Location: 27695-28510 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 27815-28367 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 27815-283 67 bp Feature: gene Location: 28767-29741 bp Feature: domain Description: PRK04247 Location: 28794-29112 bp Feature: domain Description: PRK04247 Location: 28794-29112 bp Feature: gene Location: 29775-30782 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT SIR2_2 (pfam13289), RVT-Retrons, PRK04247 (endonuclease NucS)