myRT

myRT report for GCA_000405445.1_ASM40544v1

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Seq: ASOT01000013.1 Aminicenantes bacterium SCGC AAA252-L10 A252L10DRAFT_contig_12_0.13_C, whole genome shotgun sequence (37407 bp)
Overview 1 RT 1: 6156-13030 bp Neighborhood of RT #1 [6156, 13030] PRK04247 RVT-Retrons SIR2_2 Feature: gene Location: 6156-7163 bp Feature: gene Location: 7197-8171 bp Feature: domain Description: PRK04247 Location: 7224-7542 bp Feature: domain Description: PRK04247 Location: 7224-7542 bp Feature: gene Location: 8428-9243 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 8548-9100 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 8548-91 00 bp Feature: gene Location: 10406-11416 bp Feature: domain Description: SIR2_2 Location: 10754-11315 bp Feature: domain Description: SIR2_2 Location: 1 0754-1 1 31 5 bp Feature: gene Location: 11825-13030 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT SIR2_2 (pfam13289), PRK04247 (endonuclease NucS), RVT-Retrons

Seq: ASOT01000048.1 Aminicenantes bacterium SCGC AAA252-L10 A252L10DRAFT_contig_47_0.48_C, whole genome shotgun sequence (11272 bp)
Overview 1 RT 1: 1653-6173 bp Neighborhood of RT #1 [1653, 6178] HTH_32 RVT-GII AzgA PRK02304 Feature: gene Location: 1653-2297 bp Feature: domain Description: HTH_32 Location: 1842-2052 bp Feature: domain Description: HTH_32 Location: 1842 -2 052 bp Feature: gene Location: 2500-2709 bp Feature: gene Location: 2816-4198 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3164-3845 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3164-3845 bp Feature: gene Location: 4308-5633 bp Feature: domain Description: AzgA Location: 4314-5628 bp Feature: domain Description: AzgA Location: 4314-562 8 bp Feature: gene Location: 5642-6178 bp Feature: domain Description: PRK02304 Location: 5654-6173 bp Feature: domain Description: PRK02 304 Location: 5654-6173 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HTH_32 (pfam13565), RVT-GII, AzgA (COG2252), PRK02304 (adenine phosphoribosyltransferase; Provisional)