myRT

myRT report for GCA_000405725.1_ASM40572v1

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Seq: ASON01000014.1 Aminicenantes bacterium SCGC AAA252-J09 A252J9DRAFT_contig_13_0.14_C, whole genome shotgun sequence (6761 bp)
Overview 1 RT 1: 498-4778 bp Neighborhood of RT #1 [498, 5023] PRK02304 AzgA RVT-GII HTH_32 Feature: gene Location: 498-1034 bp Feature: domain Description: PRK02304 Location: 510-1029 bp Feature: domain Description: PRK02304 Location: 51 0-1 029 bp Feature: gene Location: 1043-2368 bp Feature: domain Description: AzgA Location: 1049-2363 bp Feature: domain Description: AzgA Location: 1 049-2363 bp Feature: gene Location: 2478-3860 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2826-3507 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2826-3507 bp Feature: gene Location: 3967-4176 bp Feature: gene Location: 4379-5023 bp Feature: domain Description: HTH_32 Location: 4568-4778 bp Feature: domain Description: HTH_32 Location: 4568-4778 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK02304 (adenine phosphoribosyltransferase; Provisional), AzgA (COG2252), RVT-GII, HTH_32 (pfam13565)

Seq: ASON01000038.1 Aminicenantes bacterium SCGC AAA252-J09 A252J9DRAFT_contig_37_0.38_C, whole genome shotgun sequence (27127 bp)
Overview 1 RT 1: 19244-26117 bp Neighborhood of RT #1 [19244, 26117] SIR2_2 RVT-Retrons PRK04247 Feature: gene Location: 19244-20449 bp Feature: gene Location: 20858-21868 bp Feature: domain Description: SIR2_2 Location: 21206-21767 bp Feature: domain Description: SIR2 _2 Location: 2 12 06-2 1767 bp Feature: gene Location: 23030-23845 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 23150-23702 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 2 3150-2 3702 bp Feature: gene Location: 24102-25076 bp Feature: domain Description: PRK04247 Location: 24129-24447 bp Feature: domain Description: PRK042 47 Location: 2 412 9-2 4447 bp Feature: gene Location: 25110-26117 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT SIR2_2 (pfam13289), RVT-Retrons, PRK04247 (endonuclease NucS)

Seq: ASON01000041.1 Aminicenantes bacterium SCGC AAA252-J09 A252J9DRAFT_contig_40_0.41_C, whole genome shotgun sequence (24333 bp)
Overview 1 RT 1: 131-2325 bp Neighborhood of RT #1 [131, 2354] RVT-GII GIIM GT4_ExpE7-like Feature: gene Location: 131-718 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 146-266 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 146-266 bp Feature: domain Description: GIIM Note: maturase Location: 347-566 bp Feature: domain Description: GIIM Note: maturase Location: 3 47-566 bp Feature: gene Location: 835-1086 bp Feature: gene Location: 1140-2354 bp Feature: domain Description: GT4_ExpE7-like Location: 1146-2325 bp Feature: domain Description: GT4_ExpE7-like Location: 1146-23 25 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), GT4_ExpE7-like (cd03823)

Seq: ASON01000076.1 Aminicenantes bacterium SCGC AAA252-J09 A252J9DRAFT_contig_75_0.76_C, whole genome shotgun sequence (5987 bp)
Overview 1 RT 1: 4512-5894 bp Neighborhood of RT #1 [4512, 5944] RVT-GII RVT-GII Feature: gene Location: 4512-4760 bp Feature: gene Location: 4819-4995 bp Feature: gene Location: 5117-5620 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5402-5618 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 54 02-5618 bp Feature: gene Location: 5702-5944 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5732-5894 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5732-5894 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII