myRT

myRT report for GCA_000406065.1_DCH516_1.0

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Seq: CM001904.1 Dickeya chrysanthemi NCPPB 516 chromosome, whole genome shotgun sequence (4549457 bp)
Overview 1 RT 1: 1890940-1894283 bp Neighborhood of RT #1 [1890940, 1894288] DDE_Tnp_1 PHA02517 RVT-GII GIIM InsE InsE Feature: gene Location: 1890940-1891227 bp Feature: domain Description: DDE_Tnp_1 Location: 1890991-1891120 bp Feature: domain Description: DDE_Tnp_1 Location: 1 890991 -1 891 1 20 bp Feature: gene Location: 1891401-1891709 bp Feature: domain Description: PHA02517 Location: 1891404-1891704 bp Feature: domain Description: PHA0251 7 Location: 1 891 404-1 891 704 bp Feature: gene Location: 1891831-1893354 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1892104-1892836 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 8921 04-1 892836 bp Feature: domain Description: GIIM Note: maturase Location: 1892911-1893109 bp Feature: domain Description: GIIM Note: maturase Location: 1 89291 1 -1 8931 09 bp Feature: gene Location: 1893648-1893920 bp Feature: gene Location: 1894070-1894288 bp Feature: domain Description: InsE Location: 1894097-1894163 bp Feature: domain Description: InsE Location: 1 894097-1 8941 63 bp Feature: domain Description: InsE Location: 1894175-1894283 bp Feature: domain Description: InsE Location: 1 8941 75-1 894283 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DDE_Tnp_1 (pfam01609), PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, GIIM (pfam08388), InsE (COG2963)

Seq: KE136340.1 Dickeya chrysanthemi NCPPB 516 genomic scaffold contig001, whole genome shotgun sequence (17319 bp)
Overview 1 RT 1: 82-3315 bp Neighborhood of RT #1 [82, 3344] RVT-GII rve HTH_29 GT4_MtfB-like Feature: gene Location: 82-297 bp Feature: gene Location: 591-1808 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 864-939 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 864-939 bp Feature: domain Description: rve Location: 1251-1617 bp Feature: domain Description: rve Location: 12 51-1617 bp Feature: gene Location: 1859-2092 bp Feature: domain Description: HTH_29 Location: 1928-2081 bp Feature: domain Description: HTH_2 9 Location: 192 8-2 081 bp Feature: gene Location: 2184-3344 bp Feature: domain Description: GT4_MtfB-like Location: 2190-3315 bp Feature: domain Description: GT4_MtfB-like Location: 2 190-3315 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, rve (pfam00665), HTH_29 (pfam13551), GT4_MtfB-like (cd03809)