myRT

myRT report for GCA_000406145.1_DDA898_1.0

Download annotations/find similar RTs

Seq: CM001976.1 Dickeya dadantii NCPPB 898 chromosome, whole genome shotgun sequence (4829443 bp)
Overview 1 RT 1: 576103-581950 bp 2 RT 2: 4708664-4714822 bp Neighborhood of RT #1 [576103, 581950] groES groEL RVT_N RVT-GII GIIM HNHc Neighborhood of RT #2 [4708664, 4714926] TIGR02646 COG3950 RVT-Retrons PRK15409 DUF4432 Feature: gene Location: 576103-576396 bp Feature: domain Description: groES Location: 576106-576391 bp Feature: domain Description: groES Location: 5761 06-576391 bp Feature: gene Location: 576447-578093 bp Feature: domain Description: groEL Location: 576453-578079 bp Feature: domain Description: groEL Location: 576453-578079 bp Feature: gene Location: 579204-580907 bp Feature: RT Description: RVT_N Location: 579255-579498 bp Feature: RT Description: RVT_N Location: 579255-579498 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 579543-580188 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 579543-5801 88 bp Feature: domain Description: GIIM Note: maturase Location: 580242-580473 bp Feature: domain Description: GIIM Note: maturase Location: 580242-580473 bp Feature: domain Description: HNHc Note: nucleases Location: 580686-580845 bp Feature: domain Description: HNHc Note: nucleases Location: 580686-580845 bp Feature: gene Location: 581295-581561 bp Feature: gene Location: 581741-581950 bp Feature: gene Location: 4708664-4709311 bp Feature: domain Description: TIGR02646 Location: 4708742-4709141 bp Feature: domain Description: TIGR02646 Location: 4708742-47091 41 bp Feature: gene Location: 4709308-4710963 bp Feature: domain Description: COG3950 Location: 4709506-4710856 bp Feature: domain Description: COG3950 Location: 4709506-471 0856 bp Feature: gene Location: 4710960-4711898 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 4711062-4711662 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 471 1 062-471 1 662 bp Feature: gene Location: 4712653-4713615 bp Feature: domain Description: PRK15409 Location: 4712656-4713607 bp Feature: domain Description: PRK1 5409 Location: 471 2656-471 3607 bp Feature: gene Location: 4713718-4714926 bp Feature: domain Description: DUF4432 Location: 4713907-4714822 bp Feature: domain Description: DUF4432 Location: 471 3907-471 4822 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT groES (PRK14533), groEL (PRK12852), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNHc (smart00507), TIGR02646 (TIGR02646 family protein), COG3950 (Predicted ATP-binding protein involved in virulence ), RVT-Retrons, PRK15409 (glyoxylate/hydroxypyruvate reductase GhrB)
DUF4432 (pfam14486)